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The map label for this gene is ybiX [C]

Identifier: 197103758

GI number: 197103758

Start: 287201

End: 287884

Strand: Reverse

Name: ybiX [C]

Synonym: PHZ_c0292

Alternate gene names: 197103758

Gene position: 287884-287201 (Counterclockwise)

Preceding gene: 197103759

Following gene: 197103757

Centisome position: 7.2

GC content: 71.35

Gene sequence:

>684_bases
ATGATGCTGCACATCCCGCAAGTCCTCTCCAAGGCCAAGGTCGCCGAGCTGCGCGCCCTGATCGACGCCGCTCCGTGGGT
CGACGGCAACGAGACCTCCGGGACCCAGTCGGCGCTCGCCAAGCGCAACGCCCAGCTCCCCGAGGGCTCGCCCGCGGCGA
CGCAGGCGGGCGAGGCGATCCTGGACGCCCTGGAGCGCAATCCGCTGTTCGTGGCCGCCGCCCTGCCGCAGGTGGTCTTC
CCGCCGCTGTTCAACCGCTACGCCGGCGGCGAGGCGTTCGGCCTGCACGTGGACAACTCGATCCGCCAGAGCCGCGACGG
GCGCACCCGCATCCGCAGCGACCTGTCGGCGACGCTGTTCCTGACCGAGCCCGAGGACTACGACGGCGGGGTGCTGGTGG
TGGAGGACACCTTCGGCGCCCACGAGGTGAAGCTGCCGGCCGGCGACATGATCCTCTACCCGGCCTCCAGCCTGCACGAG
GTGACGCCGGTGACCCGCGGCGCGCGGGTCTGCAGCTTCTTCTGGATCCAGAGCCTGGTGCGCGAGGACGCCCGCCGCGA
GCTGCTGTTCCAGATGGACCTGGCGATCCAGCAGCTCGGCGCGCGCATCGGCGCCGACGCCCCCGAGCTGGTCTCGCTGA
CTGGCGGCTATCACAACCTGCTGCGGATGTGGGCCGAGGTCTGA

Upstream 100 bases:

>100_bases
CTGACCTCCCCACGGTAGCCGGACGCGCGCGGCCCCGTTTCCGGAAGGAGGCGGGGCCGCCCTAGTGTGTGATCCGACGC
GAGACCCGAAGGCGCCCGCC

Downstream 100 bases:

>100_bases
CGCGGGCTACCGTCGGCGACGAAAAGCCGGTATGCCGCGCGCCTCTGCCCGAAGGAGCCCGCCATGCCGCTCGATACAGC
CCCGCAAAAGACGTTCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MMLHIPQVLSKAKVAELRALIDAAPWVDGNETSGTQSALAKRNAQLPEGSPAATQAGEAILDALERNPLFVAAALPQVVF
PPLFNRYAGGEAFGLHVDNSIRQSRDGRTRIRSDLSATLFLTEPEDYDGGVLVVEDTFGAHEVKLPAGDMILYPASSLHE
VTPVTRGARVCSFFWIQSLVREDARRELLFQMDLAIQQLGARIGADAPELVSLTGGYHNLLRMWAEV

Sequences:

>Translated_227_residues
MMLHIPQVLSKAKVAELRALIDAAPWVDGNETSGTQSALAKRNAQLPEGSPAATQAGEAILDALERNPLFVAAALPQVVF
PPLFNRYAGGEAFGLHVDNSIRQSRDGRTRIRSDLSATLFLTEPEDYDGGVLVVEDTFGAHEVKLPAGDMILYPASSLHE
VTPVTRGARVCSFFWIQSLVREDARRELLFQMDLAIQQLGARIGADAPELVSLTGGYHNLLRMWAEV
>Mature_227_residues
MMLHIPQVLSKAKVAELRALIDAAPWVDGNETSGTQSALAKRNAQLPEGSPAATQAGEAILDALERNPLFVAAALPQVVF
PPLFNRYAGGEAFGLHVDNSIRQSRDGRTRIRSDLSATLFLTEPEDYDGGVLVVEDTFGAHEVKLPAGDMILYPASSLHE
VTPVTRGARVCSFFWIQSLVREDARRELLFQMDLAIQQLGARIGADAPELVSLTGGYHNLLRMWAEV

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain

Homologues:

Organism=Escherichia coli, GI87081784, Length=227, Percent_Identity=52.4229074889868, Blast_Score=243, Evalue=8e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y292_PHEZH (B4RDA2)

Other databases:

- EMBL:   CP000747
- RefSeq:   YP_002129135.1
- GeneID:   6789782
- GenomeReviews:   CP000747_GR
- KEGG:   pzu:PHZ_c0292
- HOGENOM:   HBG285605
- OMA:   ADWADGK
- HAMAP:   MF_00657
- InterPro:   IPR005123
- InterPro:   IPR006620
- SMART:   SM00702

Pfam domain/function: PF03171 2OG-FeII_Oxy

EC number: 1.14.11.- [C]

Molecular weight: Translated: 24718; Mature: 24718

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS51471 FE2OG_OXY

Important sites: BINDING 169-169

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLHIPQVLSKAKVAELRALIDAAPWVDGNETSGTQSALAKRNAQLPEGSPAATQAGEAI
CEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
LDALERNPLFVAAALPQVVFPPLFNRYAGGEAFGLHVDNSIRQSRDGRTRIRSDLSATLF
HHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCHHHHHHHCCCEEEE
LTEPEDYDGGVLVVEDTFGAHEVKLPAGDMILYPASSLHEVTPVTRGARVCSFFWIQSLV
EECCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHH
REDARRELLFQMDLAIQQLGARIGADAPELVSLTGGYHNLLRMWAEV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MMLHIPQVLSKAKVAELRALIDAAPWVDGNETSGTQSALAKRNAQLPEGSPAATQAGEAI
CEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
LDALERNPLFVAAALPQVVFPPLFNRYAGGEAFGLHVDNSIRQSRDGRTRIRSDLSATLF
HHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCHHHHHHHCCCEEEE
LTEPEDYDGGVLVVEDTFGAHEVKLPAGDMILYPASSLHEVTPVTRGARVCSFFWIQSLV
EECCCCCCCCEEEEECCCCCEEEECCCCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHH
REDARRELLFQMDLAIQQLGARIGADAPELVSLTGGYHNLLRMWAEV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA