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The map label for this gene is yibP [H]

Identifier: 197103711

GI number: 197103711

Start: 247519

End: 248367

Strand: Reverse

Name: yibP [H]

Synonym: PHZ_c0245

Alternate gene names: 197103711

Gene position: 248367-247519 (Counterclockwise)

Preceding gene: 197103712

Following gene: 197103710

Centisome position: 6.21

GC content: 72.91

Gene sequence:

>849_bases
ATGCGCGGGCGGATCCTGATCTTCGGCGGACTTGCGGCGGCGGCGCTCTCGGCCGTGGCCTTCGCCGCGACCACCGACCA
GCTCACCCGGCTGAACCTGGCCGAGACCGAGATCTCGGCCGAACAGGCCCGCAACCGCCACCGGCTGGCCCGGATGCTGT
CGGTGCTGGAGCAGCTGCGGCGCGACCCGCCGCCGGCGCTGCTCGTCTCGCCCGACGACGCCAAGGACGCCGTCCGCGCC
GCCATCCTGGTCAAGGCGGTGACGCCCGAGTTGCAGGCCCGCGCCCGCAGCTACGCCAAGGACGCGGGCGAGGTGATGCG
CCAGCGCCGTCTGGCGGCCGTGCAGTCCGAGGCGCTGTTCGAGCGCGAGAGCCTGCAGGCCGAGTCCCTGCCCGAGCCGC
AGTCGAAGGCGGGTCTGGCGCTGCGCGGTCCCGTCGCGACCCTGCCGCCGGGCGTGCTGAAGGCGCCGGCGACACTGCTC
TCCCCGACGCCCGGGCCGATCGTGCGCCGCTTCGGCGAGCCGCTCGCGGGCGGCGGACAGGCCAATGGCGTGACCCTGGC
CGCGCCCCGCGGCGCCCGGGTCGCGGCGCCCGGCGACGGGGTGGTCCAGTACGTCGGCCCGGTGAAAGGCTGGGGCGTCA
TCCTTATTTTAAGGCTGGCGGGCGGCTATCATCTCGTGCTTGCTGGTCTCGAAAGAACGTCGGTCGAGGTCGGACAATCC
GTCGCGGCGGGGCAGCCTGTCGGATGGGCGGCGGAAGGTCGACAATCCACGTCCGAGCTCTATCTCGAGGTTCGGGAGCA
GGGCTCTCCGGTCGATCCGGGCCGGTGGTTGAACAAAAGGGCGGGCTGA

Upstream 100 bases:

>100_bases
GCCCCCAGACCTGGCCCCACGCCCTGGCCCGCGCCATGCTGGCCGAGCAGGTCTATCGGGCGGTCTCAATTCTGGCCGGA
TCGCCGTATCATAGGGACTG

Downstream 100 bases:

>100_bases
GCGCTGCTTTAGAGGGGCGTCCGGGGCCTGAACACAGAACAGCGGCGCTGGCCGCCTAGGGAGCCTGAGGAAGGCGATGA
GAAAGTACCTCCTGATCGGC

Product: peptidase, M23/M37 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MRGRILIFGGLAAAALSAVAFAATTDQLTRLNLAETEISAEQARNRHRLARMLSVLEQLRRDPPPALLVSPDDAKDAVRA
AILVKAVTPELQARARSYAKDAGEVMRQRRLAAVQSEALFERESLQAESLPEPQSKAGLALRGPVATLPPGVLKAPATLL
SPTPGPIVRRFGEPLAGGGQANGVTLAAPRGARVAAPGDGVVQYVGPVKGWGVILILRLAGGYHLVLAGLERTSVEVGQS
VAAGQPVGWAAEGRQSTSELYLEVREQGSPVDPGRWLNKRAG

Sequences:

>Translated_282_residues
MRGRILIFGGLAAAALSAVAFAATTDQLTRLNLAETEISAEQARNRHRLARMLSVLEQLRRDPPPALLVSPDDAKDAVRA
AILVKAVTPELQARARSYAKDAGEVMRQRRLAAVQSEALFERESLQAESLPEPQSKAGLALRGPVATLPPGVLKAPATLL
SPTPGPIVRRFGEPLAGGGQANGVTLAAPRGARVAAPGDGVVQYVGPVKGWGVILILRLAGGYHLVLAGLERTSVEVGQS
VAAGQPVGWAAEGRQSTSELYLEVREQGSPVDPGRWLNKRAG
>Mature_282_residues
MRGRILIFGGLAAAALSAVAFAATTDQLTRLNLAETEISAEQARNRHRLARMLSVLEQLRRDPPPALLVSPDDAKDAVRA
AILVKAVTPELQARARSYAKDAGEVMRQRRLAAVQSEALFERESLQAESLPEPQSKAGLALRGPVATLPPGVLKAPATLL
SPTPGPIVRRFGEPLAGGGQANGVTLAAPRGARVAAPGDGVVQYVGPVKGWGVILILRLAGGYHLVLAGLERTSVEVGQS
VAAGQPVGWAAEGRQSTSELYLEVREQGSPVDPGRWLNKRAG

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=120, Percent_Identity=34.1666666666667, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 29637; Mature: 29637

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGRILIFGGLAAAALSAVAFAATTDQLTRLNLAETEISAEQARNRHRLARMLSVLEQLR
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDPPPALLVSPDDAKDAVRAAILVKAVTPELQARARSYAKDAGEVMRQRRLAAVQSEALF
CCCCCEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERESLQAESLPEPQSKAGLALRGPVATLPPGVLKAPATLLSPTPGPIVRRFGEPLAGGGQ
HHHHCCHHCCCCCHHHCCEEEECCCCCCCCCHHHCCHHHCCCCCCHHHHHCCCCCCCCCC
ANGVTLAAPRGARVAAPGDGVVQYVGPVKGWGVILILRLAGGYHLVLAGLERTSVEVGQS
CCCEEEECCCCCEEECCCCCCEEECCCCCCCHHEEHEECCCCEEEEEECCHHHHHHHCCH
VAAGQPVGWAAEGRQSTSELYLEVREQGSPVDPGRWLNKRAG
HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MRGRILIFGGLAAAALSAVAFAATTDQLTRLNLAETEISAEQARNRHRLARMLSVLEQLR
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDPPPALLVSPDDAKDAVRAAILVKAVTPELQARARSYAKDAGEVMRQRRLAAVQSEALF
CCCCCEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERESLQAESLPEPQSKAGLALRGPVATLPPGVLKAPATLLSPTPGPIVRRFGEPLAGGGQ
HHHHCCHHCCCCCHHHCCEEEECCCCCCCCCHHHCCHHHCCCCCCHHHHHCCCCCCCCCC
ANGVTLAAPRGARVAAPGDGVVQYVGPVKGWGVILILRLAGGYHLVLAGLERTSVEVGQS
CCCEEEECCCCCEEECCCCCCEEECCCCCCCHHEEHEECCCCEEEEEECCHHHHHHHCCH
VAAGQPVGWAAEGRQSTSELYLEVREQGSPVDPGRWLNKRAG
HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]