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The map label for this gene is ctpA [H]

Identifier: 197103710

GI number: 197103710

Start: 246048

End: 247442

Strand: Reverse

Name: ctpA [H]

Synonym: PHZ_c0244

Alternate gene names: 197103710

Gene position: 247442-246048 (Counterclockwise)

Preceding gene: 197103711

Following gene: 197103709

Centisome position: 6.19

GC content: 70.11

Gene sequence:

>1395_bases
ATGAGAAAGTACCTCCTGATCGGCGCGTCCGCGTTCATCCTGGGCGCCGGATCCATGGCCTACGTGAGCCAGCAGGCGAT
CGCCTCGGCGCAGCCGCGGGCCAAGACGTACCGGATGCTCGGCCTGTTCGGCGACGTGCTGAACACCGTCGAGAACCAGT
ACGTGACGGAGGTCGACGACACCAAGCTGATCCAGGCCGCGATCGACGGCATGCTGACCTCCCTGGATCCGCACTCGGGC
TATCTCGACGCCTCCGACTTCGACGACATGCGCGACCAGACCCGCGGCGAGTACGGCGGCCTGGGCATCGAGGTCACCAG
CGAGGACGGCGTGGTCAAGGTGATCTCGCCGATGGACGAGACCCCCGCCGCCCGGGCCGGGATCAAGGCCGGCGACTACA
TCACCGCCGTCAACGGCGAGAGCGTGCTGGGCCTGTCGGTGAACGAGGCCGTCAAGCAGATGCGCGGCAAGCCCGGCGAT
CCGGTCACCCTGACCATCGCGCGCGAGAAGGCCGACCCGTTCGACGTGAAGCTGGTGCGCGAGGTCATCAAGCCGCGCAC
GGCGACGGCGCGGATGGAGGGCGACTACGGCCTGCTGCGCGTCTCGGCGTTCAACGAGAAGACCACGGACGAGGCGGAAG
AGGCCTTCCACCAGCTCCGCATGAAGAACCCCGCCATGAAGGGGCTGATCCTCGACCTGCGGAACAACCCGGGCGGGCTG
CTCGACCAGGCGGTCGGCGTCTCGGACCTGTTCCTGGAGGGCGGCGAGATCGTCAGCCAGCGCGGCCGCGACCCGCGCGA
CGTCGAGCGCTACAACGCCCGGCCGGGCGACATCACCGGCGGCCTGCCCATCGTGGTGCTCATCAACACCGGCTCGGCCT
CGGCGGCCGAGATCGTCGCCGGCGCCCTGCAGGACCGCAAGCGCGCCGAGATCGTCGGCCTGACCAGCTTCGGCAAGGGC
TCGGTCCAGACCGTGATCCCGCTGCGCGGCGGCATCGACGGGGCGCTGAAGCTCACGACGGCGCGCTACTACACCCCGTC
CGGCCGCTCGATCCAGCAGACCGGCATCGAGCCCGACCTCGAGGTCGCCTCGACCCGCGAGGAGGCCCAGGCCATCGCCA
ACCGCGCCTACCAGTTCTCGGAGGCCTCGTTCCGCAACGCGCTGAACGCCGACGAGGGCAAGGCCCGCCGCGGCGCCCAC
GAGCCGGCCGAGGCCCCGCCCGAGAGCTTCGACGAGGCCAAGGACTTCCAGATCGCCCGGGCCATGGACGTGCTGAAGTT
CGGCTCGGTGGCGGCCACGCCCAAGCTGCCGAAGCCGCAGGCCAAGCTCGCCGGCATCGTGGCCAAGGACAAGGTCGCCG
CCGTCAAGCCGCCGCCGTCGGTCACCCAGAAGTAG

Upstream 100 bases:

>100_bases
TGGTTGAACAAAAGGGCGGGCTGAGCGCTGCTTTAGAGGGGCGTCCGGGGCCTGAACACAGAACAGCGGCGCTGGCCGCC
TAGGGAGCCTGAGGAAGGCG

Downstream 100 bases:

>100_bases
CGGCCCGTTAACCATGGTGCGGGAGGCTCCCCCGGAAGGAGCCTCCCGCGCGTGGCGAACATCGCACTGCCCCAGTTCAA
GCCTCCCGCCTTCAAGCTTC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MRKYLLIGASAFILGAGSMAYVSQQAIASAQPRAKTYRMLGLFGDVLNTVENQYVTEVDDTKLIQAAIDGMLTSLDPHSG
YLDASDFDDMRDQTRGEYGGLGIEVTSEDGVVKVISPMDETPAARAGIKAGDYITAVNGESVLGLSVNEAVKQMRGKPGD
PVTLTIAREKADPFDVKLVREVIKPRTATARMEGDYGLLRVSAFNEKTTDEAEEAFHQLRMKNPAMKGLILDLRNNPGGL
LDQAVGVSDLFLEGGEIVSQRGRDPRDVERYNARPGDITGGLPIVVLINTGSASAAEIVAGALQDRKRAEIVGLTSFGKG
SVQTVIPLRGGIDGALKLTTARYYTPSGRSIQQTGIEPDLEVASTREEAQAIANRAYQFSEASFRNALNADEGKARRGAH
EPAEAPPESFDEAKDFQIARAMDVLKFGSVAATPKLPKPQAKLAGIVAKDKVAAVKPPPSVTQK

Sequences:

>Translated_464_residues
MRKYLLIGASAFILGAGSMAYVSQQAIASAQPRAKTYRMLGLFGDVLNTVENQYVTEVDDTKLIQAAIDGMLTSLDPHSG
YLDASDFDDMRDQTRGEYGGLGIEVTSEDGVVKVISPMDETPAARAGIKAGDYITAVNGESVLGLSVNEAVKQMRGKPGD
PVTLTIAREKADPFDVKLVREVIKPRTATARMEGDYGLLRVSAFNEKTTDEAEEAFHQLRMKNPAMKGLILDLRNNPGGL
LDQAVGVSDLFLEGGEIVSQRGRDPRDVERYNARPGDITGGLPIVVLINTGSASAAEIVAGALQDRKRAEIVGLTSFGKG
SVQTVIPLRGGIDGALKLTTARYYTPSGRSIQQTGIEPDLEVASTREEAQAIANRAYQFSEASFRNALNADEGKARRGAH
EPAEAPPESFDEAKDFQIARAMDVLKFGSVAATPKLPKPQAKLAGIVAKDKVAAVKPPPSVTQK
>Mature_464_residues
MRKYLLIGASAFILGAGSMAYVSQQAIASAQPRAKTYRMLGLFGDVLNTVENQYVTEVDDTKLIQAAIDGMLTSLDPHSG
YLDASDFDDMRDQTRGEYGGLGIEVTSEDGVVKVISPMDETPAARAGIKAGDYITAVNGESVLGLSVNEAVKQMRGKPGD
PVTLTIAREKADPFDVKLVREVIKPRTATARMEGDYGLLRVSAFNEKTTDEAEEAFHQLRMKNPAMKGLILDLRNNPGGL
LDQAVGVSDLFLEGGEIVSQRGRDPRDVERYNARPGDITGGLPIVVLINTGSASAAEIVAGALQDRKRAEIVGLTSFGKG
SVQTVIPLRGGIDGALKLTTARYYTPSGRSIQQTGIEPDLEVASTREEAQAIANRAYQFSEASFRNALNADEGKARRGAH
EPAEAPPESFDEAKDFQIARAMDVLKFGSVAATPKLPKPQAKLAGIVAKDKVAAVKPPPSVTQK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=329, Percent_Identity=29.483282674772, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 49605; Mature: 49605

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYLLIGASAFILGAGSMAYVSQQAIASAQPRAKTYRMLGLFGDVLNTVENQYVTEVDD
CCEEEEEECCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEECCCCH
TKLIQAAIDGMLTSLDPHSGYLDASDFDDMRDQTRGEYGGLGIEVTSEDGVVKVISPMDE
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCC
TPAARAGIKAGDYITAVNGESVLGLSVNEAVKQMRGKPGDPVTLTIAREKADPFDVKLVR
CCHHHCCCCCCCEEEEECCCEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH
EVIKPRTATARMEGDYGLLRVSAFNEKTTDEAEEAFHQLRMKNPAMKGLILDLRNNPGGL
HHHCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH
LDQAVGVSDLFLEGGEIVSQRGRDPRDVERYNARPGDITGGLPIVVLINTGSASAAEIVA
HHHHCCHHHHHHCCCHHHHHCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHH
GALQDRKRAEIVGLTSFGKGSVQTVIPLRGGIDGALKLTTARYYTPSGRSIQQTGIEPDL
HHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHCCCCCCC
EVASTREEAQAIANRAYQFSEASFRNALNADEGKARRGAHEPAEAPPESFDEAKDFQIAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH
AMDVLKFGSVAATPKLPKPQAKLAGIVAKDKVAAVKPPPSVTQK
HHHHHHHCCCCCCCCCCCCHHHHHCEEECCCEEEECCCCCCCCC
>Mature Secondary Structure
MRKYLLIGASAFILGAGSMAYVSQQAIASAQPRAKTYRMLGLFGDVLNTVENQYVTEVDD
CCEEEEEECCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEECCCCH
TKLIQAAIDGMLTSLDPHSGYLDASDFDDMRDQTRGEYGGLGIEVTSEDGVVKVISPMDE
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCC
TPAARAGIKAGDYITAVNGESVLGLSVNEAVKQMRGKPGDPVTLTIAREKADPFDVKLVR
CCHHHCCCCCCCEEEEECCCEEEECCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH
EVIKPRTATARMEGDYGLLRVSAFNEKTTDEAEEAFHQLRMKNPAMKGLILDLRNNPGGL
HHHCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH
LDQAVGVSDLFLEGGEIVSQRGRDPRDVERYNARPGDITGGLPIVVLINTGSASAAEIVA
HHHHCCHHHHHHCCCHHHHHCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHH
GALQDRKRAEIVGLTSFGKGSVQTVIPLRGGIDGALKLTTARYYTPSGRSIQQTGIEPDL
HHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHCCCCCCC
EVASTREEAQAIANRAYQFSEASFRNALNADEGKARRGAHEPAEAPPESFDEAKDFQIAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH
AMDVLKFGSVAATPKLPKPQAKLAGIVAKDKVAAVKPPPSVTQK
HHHHHHHCCCCCCCCCCCCHHHHHCEEECCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]