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The map label for this gene is ftsY [H]

Identifier: 197103597

GI number: 197103597

Start: 123884

End: 124828

Strand: Direct

Name: ftsY [H]

Synonym: PHZ_c0131

Alternate gene names: 197103597

Gene position: 123884-124828 (Clockwise)

Preceding gene: 197103595

Following gene: 197103598

Centisome position: 3.1

GC content: 69.84

Gene sequence:

>945_bases
ATGTCAGAACCCAAACGCGGCTGGTTCCAGCGCCTCACACAGGGGCTCACCAAGTCGTCGAAGCAGATGGGCGACCAGAT
CGCCTCTGTGTTCACGGCCAAGGAGCCGCTCGACCAGGCCAAGCTGGACGAGCTGGAGGAGATGCTGATCGAGGCCGACC
TCGGCCCGCATTCCGCCGCCCGCATCACCGCCCGCTTCGCCGAGGAGAAGTTCGGCAAGGACGTCGGCGAGGAGGAGATC
AAGGAGGCGCTCGCCCAGGCGATCGGCGACGAGCTGTCGAGCCGCCAGGGCGGCTTCGACCCGCTGTCGGGCCCCAGGCC
CTACGTCGTCCTGTTCATCGGCGTGAACGGCTCGGGCAAGACCACCACGCTCGGCAAGATCGCGGCCGACCTGCGCAGCC
GGGGCGCCAAGGTCCTCATCGTCGCCGGTGACACCTTCCGCGCCGCCGCCGTCGAACAGCTCAAGGTCTGGGCCGAGCGG
GCGGGCGCCGACTTCATGGGCCGCCCGACCGGGTCCGACGCCGCGGGCCTGGCCTTCGACGCCGTGCAGCGGGCGAAGGC
CGAGGGCTACGACGTCGTGCTGATCGACACCGCCGGGCGGCTGCAGAACAAGCAGGGGCTGATGGACGAGCTCCTGAAGA
TCATCCGGGTGGTCAAGAAGCTGGACCCCGAGGCGCCGCACGAGACCCTGCTGGTCCTCGACGCCACGGTGGGGCGCAAC
GCGCTGAACCAGGAGAACATCTTCGGCAACCAGATCGGCGTCTCGGGCATCGTCATGACCAAGCTGGACGGCACCGCCCG
CGGCGGCGTGCTGGTGCCGGTCGCCCAGGCCTCGGACAGCCCCATCAAGCTGATCGGCGTGGGCGAGGGGATCGACGACC
TGCAGCCCTTCGACGCCCGCGCCTTCGCCCGCTCCCTCGTAGGCCTCGCGGAGCCCGTCCGATGA

Upstream 100 bases:

>100_bases
GCGTAGTCGAGGGCGGCGAGGGTTGCAGCGAGACCTTCCATCGCCCCTCTCATGCGGCCGCAGGTGACGCGCGGCAAGCT
CCCGGCTAGAAGCCCAACCC

Downstream 100 bases:

>100_bases
ACCAGCGCACGCGGGACTGGATCCGCTATTTCGTCGACTACTCGGCGCTCGTCGTGTTCCTCGTCGCCTACTTCATGACC
GGCAAGGACATCACGGTCGC

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSEPKRGWFQRLTQGLTKSSKQMGDQIASVFTAKEPLDQAKLDELEEMLIEADLGPHSAARITARFAEEKFGKDVGEEEI
KEALAQAIGDELSSRQGGFDPLSGPRPYVVLFIGVNGSGKTTTLGKIAADLRSRGAKVLIVAGDTFRAAAVEQLKVWAER
AGADFMGRPTGSDAAGLAFDAVQRAKAEGYDVVLIDTAGRLQNKQGLMDELLKIIRVVKKLDPEAPHETLLVLDATVGRN
ALNQENIFGNQIGVSGIVMTKLDGTARGGVLVPVAQASDSPIKLIGVGEGIDDLQPFDARAFARSLVGLAEPVR

Sequences:

>Translated_314_residues
MSEPKRGWFQRLTQGLTKSSKQMGDQIASVFTAKEPLDQAKLDELEEMLIEADLGPHSAARITARFAEEKFGKDVGEEEI
KEALAQAIGDELSSRQGGFDPLSGPRPYVVLFIGVNGSGKTTTLGKIAADLRSRGAKVLIVAGDTFRAAAVEQLKVWAER
AGADFMGRPTGSDAAGLAFDAVQRAKAEGYDVVLIDTAGRLQNKQGLMDELLKIIRVVKKLDPEAPHETLLVLDATVGRN
ALNQENIFGNQIGVSGIVMTKLDGTARGGVLVPVAQASDSPIKLIGVGEGIDDLQPFDARAFARSLVGLAEPVR
>Mature_313_residues
SEPKRGWFQRLTQGLTKSSKQMGDQIASVFTAKEPLDQAKLDELEEMLIEADLGPHSAARITARFAEEKFGKDVGEEEIK
EALAQAIGDELSSRQGGFDPLSGPRPYVVLFIGVNGSGKTTTLGKIAADLRSRGAKVLIVAGDTFRAAAVEQLKVWAERA
GADFMGRPTGSDAAGLAFDAVQRAKAEGYDVVLIDTAGRLQNKQGLMDELLKIIRVVKKLDPEAPHETLLVLDATVGRNA
LNQENIFGNQIGVSGIVMTKLDGTARGGVLVPVAQASDSPIKLIGVGEGIDDLQPFDARAFARSLVGLAEPVR

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI226371618, Length=203, Percent_Identity=35.4679802955665, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI4507215, Length=213, Percent_Identity=34.7417840375587, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI23308697, Length=304, Percent_Identity=32.2368421052632, Blast_Score=131, Evalue=6e-31,
Organism=Homo sapiens, GI295424842, Length=304, Percent_Identity=32.2368421052632, Blast_Score=131, Evalue=7e-31,
Organism=Homo sapiens, GI89061728, Length=142, Percent_Identity=31.6901408450704, Blast_Score=96, Evalue=5e-20,
Organism=Escherichia coli, GI1789874, Length=305, Percent_Identity=45.5737704918033, Blast_Score=247, Evalue=9e-67,
Organism=Escherichia coli, GI1788963, Length=280, Percent_Identity=34.6428571428571, Blast_Score=155, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17539958, Length=213, Percent_Identity=33.8028169014084, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI193206261, Length=331, Percent_Identity=31.4199395770393, Blast_Score=124, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6325345, Length=253, Percent_Identity=34.3873517786561, Blast_Score=159, Evalue=4e-40,
Organism=Saccharomyces cerevisiae, GI6320498, Length=312, Percent_Identity=27.8846153846154, Blast_Score=107, Evalue=2e-24,
Organism=Drosophila melanogaster, GI17647949, Length=213, Percent_Identity=37.0892018779343, Blast_Score=153, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24641198, Length=311, Percent_Identity=31.5112540192926, Blast_Score=128, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N; PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 33476; Mature: 33344

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPKRGWFQRLTQGLTKSSKQMGDQIASVFTAKEPLDQAKLDELEEMLIEADLGPHSAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHH
RITARFAEEKFGKDVGEEEIKEALAQAIGDELSSRQGGFDPLSGPRPYVVLFIGVNGSGK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCC
TTTLGKIAADLRSRGAKVLIVAGDTFRAAAVEQLKVWAERAGADFMGRPTGSDAAGLAFD
CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
AVQRAKAEGYDVVLIDTAGRLQNKQGLMDELLKIIRVVKKLDPEAPHETLLVLDATVGRN
HHHHHHCCCCCEEEEECCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
ALNQENIFGNQIGVSGIVMTKLDGTARGGVLVPVAQASDSPIKLIGVGEGIDDLQPFDAR
CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHH
AFARSLVGLAEPVR
HHHHHHHHHHCCCC
>Mature Secondary Structure 
SEPKRGWFQRLTQGLTKSSKQMGDQIASVFTAKEPLDQAKLDELEEMLIEADLGPHSAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHH
RITARFAEEKFGKDVGEEEIKEALAQAIGDELSSRQGGFDPLSGPRPYVVLFIGVNGSGK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCC
TTTLGKIAADLRSRGAKVLIVAGDTFRAAAVEQLKVWAERAGADFMGRPTGSDAAGLAFD
CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
AVQRAKAEGYDVVLIDTAGRLQNKQGLMDELLKIIRVVKKLDPEAPHETLLVLDATVGRN
HHHHHHCCCCCEEEEECCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
ALNQENIFGNQIGVSGIVMTKLDGTARGGVLVPVAQASDSPIKLIGVGEGIDDLQPFDAR
CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHH
AFARSLVGLAEPVR
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]