Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is ispZ [H]

Identifier: 197103598

GI number: 197103598

Start: 124825

End: 125406

Strand: Direct

Name: ispZ [H]

Synonym: PHZ_c0132

Alternate gene names: 197103598

Gene position: 124825-125406 (Clockwise)

Preceding gene: 197103597

Following gene: 197103599

Centisome position: 3.12

GC content: 66.32

Gene sequence:

>582_bases
ATGAACCAGCGCACGCGGGACTGGATCCGCTATTTCGTCGACTACTCGGCGCTCGTCGTGTTCCTCGTCGCCTACTTCAT
GACCGGCAAGGACATCACGGTCGCCACCTGGGCCCTGGTGGTGGGTTCGGGGATCGCGCTGGTCGTCGGCCTGGCGGTGG
AGCGGCGGATCGCGCCCTTCCCCCTTATCGCCTGCGCCGCTGGCCTGGTGTTCGGCGGGCTGGCGCTGTTCTTCCACGAC
CCGCGGCTCCTGAAGATCAAGCCGACCATCATGAACGGGATCTTCGGCCTGGTGCTGACGGTCGGCCTCTTCATGGGCAA
GCACCCGCTCAAGCTGCTGCTGGGCGAGGCGTTCCAGATGCCCGAGCCCGCCTGGCGGCGGCTGACCATCAACTATGCGC
TGTTCTTCTTCGCCCTGGCGGGGCTGAACGAATTCGTCTGGCGGACCCAGGCCGAGGAGGTCTGGGTGGTGTTCCGCTTC
CCCGGCTTGATGATCCTCACGCTGGTCTTTTCGATCGCCCACGCCCCGCTGCTGATGAAGTACGTGCGCGCCGACGAGCT
GCCGCCGCCGCCGACGGAGTAA

Upstream 100 bases:

>100_bases
CCATCAAGCTGATCGGCGTGGGCGAGGGGATCGACGACCTGCAGCCCTTCGACGCCCGCGCCTTCGCCCGCTCCCTCGTA
GGCCTCGCGGAGCCCGTCCG

Downstream 100 bases:

>100_bases
GGTTCGGGGGACGGGATCGTCCGTCGTCAAACCGTCGCAGAGAGCGGCTAAGTCTTGCCGCCGTCCAAGCCAGTTGGGGG
ACGGTGACGACCATGGCCAA

Product: intracellular septation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNQRTRDWIRYFVDYSALVVFLVAYFMTGKDITVATWALVVGSGIALVVGLAVERRIAPFPLIACAAGLVFGGLALFFHD
PRLLKIKPTIMNGIFGLVLTVGLFMGKHPLKLLLGEAFQMPEPAWRRLTINYALFFFALAGLNEFVWRTQAEEVWVVFRF
PGLMILTLVFSIAHAPLLMKYVRADELPPPPTE

Sequences:

>Translated_193_residues
MNQRTRDWIRYFVDYSALVVFLVAYFMTGKDITVATWALVVGSGIALVVGLAVERRIAPFPLIACAAGLVFGGLALFFHD
PRLLKIKPTIMNGIFGLVLTVGLFMGKHPLKLLLGEAFQMPEPAWRRLTINYALFFFALAGLNEFVWRTQAEEVWVVFRF
PGLMILTLVFSIAHAPLLMKYVRADELPPPPTE
>Mature_193_residues
MNQRTRDWIRYFVDYSALVVFLVAYFMTGKDITVATWALVVGSGIALVVGLAVERRIAPFPLIACAAGLVFGGLALFFHD
PRLLKIKPTIMNGIFGLVLTVGLFMGKHPLKLLLGEAFQMPEPAWRRLTINYALFFFALAGLNEFVWRTQAEEVWVVFRF
PGLMILTLVFSIAHAPLLMKYVRADELPPPPTE

Specific function: Involved in cell division; probably involved in intracellular septation [H]

COG id: COG2917

COG function: function code D; Intracellular septation protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ispZ family [H]

Homologues:

Organism=Escherichia coli, GI1787507, Length=179, Percent_Identity=31.2849162011173, Blast_Score=91, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006008 [H]

Pfam domain/function: PF04279 IspA [H]

EC number: NA

Molecular weight: Translated: 21688; Mature: 21688

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRTRDWIRYFVDYSALVVFLVAYFMTGKDITVATWALVVGSGIALVVGLAVERRIAPF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCC
PLIACAAGLVFGGLALFFHDPRLLKIKPTIMNGIFGLVLTVGLFMGKHPLKLLLGEAFQM
HHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PEPAWRRLTINYALFFFALAGLNEFVWRTQAEEVWVVFRFPGLMILTLVFSIAHAPLLMK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
YVRADELPPPPTE
HHHHCCCCCCCCC
>Mature Secondary Structure
MNQRTRDWIRYFVDYSALVVFLVAYFMTGKDITVATWALVVGSGIALVVGLAVERRIAPF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCC
PLIACAAGLVFGGLALFFHDPRLLKIKPTIMNGIFGLVLTVGLFMGKHPLKLLLGEAFQM
HHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PEPAWRRLTINYALFFFALAGLNEFVWRTQAEEVWVVFRFPGLMILTLVFSIAHAPLLMK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
YVRADELPPPPTE
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]