| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103595
Identifier: 197103595
GI number: 197103595
Start: 122757
End: 123188
Strand: Direct
Name: 197103595
Synonym: PHZ_c0129
Alternate gene names: NA
Gene position: 122757-123188 (Clockwise)
Preceding gene: 197103594
Following gene: 197103597
Centisome position: 3.07
GC content: 71.3
Gene sequence:
>432_bases ATGAGCTGGACCGGCGGATGCCAGTGCGGGAAGGTCCGCTTCCGGGTGGAGGGCGAGCTGGGGCGCGCCAGCATCTGCCA CTGCCGCATGTGCCAGAAGGCGACCGGCGGCCCGTTCGGCGCGTTCGTGGGCGTGGACCGGGACCGGCTGACCTGGACGG GGGAGGAACCCGCCCGCTTCCAGAGCTCCAACCTCGTGCGCCGGGGCTTCTGCCCATCGTGCGGGACGCCGCTGACCTTC GAGACGGCCAAGAGCATCGACCTGACCATCTTCGCCTTCGACCGCGCCGCCGAGATCGCGCCGACCGTGCAGCTGGAGCC CGAGAGCTCGCCGGGGTGGATGGCGCACATCGCCGAGCTGGAGGTCGAGCGCCCGCCGCCCGGCTACTACGAGCGGATCC AGAACTACCAGCACCCCGACCGCGACGACTGA
Upstream 100 bases:
>100_bases CCTTCACCGGCGAGGCGGCGGAGGGGGCCGTCGTCGCCCTGGCGGTCACCGCACACGACGGCCGGCGGGCGATCGCCCGC GTTCAGGAGAGGGGCGCGGC
Downstream 100 bases:
>100_bases TCAGTCCTCGGGTTCCGGCGGCGGCCGGCCGGGGAAGCCCGGCATCTTCCAGCCGAACAGGATCGCCCCCGCCCGCAGCG ACAGCGCGACGGCGAAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Gfa
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSWTGGCQCGKVRFRVEGELGRASICHCRMCQKATGGPFGAFVGVDRDRLTWTGEEPARFQSSNLVRRGFCPSCGTPLTF ETAKSIDLTIFAFDRAAEIAPTVQLEPESSPGWMAHIAELEVERPPPGYYERIQNYQHPDRDD
Sequences:
>Translated_143_residues MSWTGGCQCGKVRFRVEGELGRASICHCRMCQKATGGPFGAFVGVDRDRLTWTGEEPARFQSSNLVRRGFCPSCGTPLTF ETAKSIDLTIFAFDRAAEIAPTVQLEPESSPGWMAHIAELEVERPPPGYYERIQNYQHPDRDD >Mature_142_residues SWTGGCQCGKVRFRVEGELGRASICHCRMCQKATGGPFGAFVGVDRDRLTWTGEEPARFQSSNLVRRGFCPSCGTPLTFE TAKSIDLTIFAFDRAAEIAPTVQLEPESSPGWMAHIAELEVERPPPGYYERIQNYQHPDRDD
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15958; Mature: 15827
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWTGGCQCGKVRFRVEGELGRASICHCRMCQKATGGPFGAFVGVDRDRLTWTGEEPARF CCCCCCCEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCC QSSNLVRRGFCPSCGTPLTFETAKSIDLTIFAFDRAAEIAPTVQLEPESSPGWMAHIAEL CCCCCEECCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEE EVERPPPGYYERIQNYQHPDRDD EECCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure SWTGGCQCGKVRFRVEGELGRASICHCRMCQKATGGPFGAFVGVDRDRLTWTGEEPARF CCCCCCEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCCC QSSNLVRRGFCPSCGTPLTFETAKSIDLTIFAFDRAAEIAPTVQLEPESSPGWMAHIAEL CCCCCEECCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEE EVERPPPGYYERIQNYQHPDRDD EECCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA