| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103496
Identifier: 197103496
GI number: 197103496
Start: 25792
End: 26310
Strand: Reverse
Name: 197103496
Synonym: PHZ_c0030
Alternate gene names: NA
Gene position: 26310-25792 (Counterclockwise)
Preceding gene: 197103498
Following gene: 197103495
Centisome position: 0.66
GC content: 74.76
Gene sequence:
>519_bases GTGAAGATTCTGGGCGCGTGGGCGGCGGCCTTGGCGGCCGTCGGGCTGCTGATCGGCATGGGCGCGGCCGGCGCCGCGGC GGCGGCCGAGCGGGCGACCCCCTCGGGCCTGCCGGTGCCGCGCTATATCTCGCTGAAGTTCGGCAAGGTGAACGCCCGCG CCGGCCCCGGCGACGACCACCGCCTCCTGTGGGTCTACCGCGCCCGCGGCCTGCCGGTGCAGGTCGTGGCCGAGACCAGC GAGTGGCGGCGCATCTGCGATCCCGAAGGCGGCCTGGCCTGGGTCCACCGGCGCGTGACGGACGGCCGCCGCTCGGTGAT GAACCTGCAGCCGGCCGCCGCGCCCCTCTTGCGCAAGCCCAAGGCGGGCGCCGAAACCGTCGCCTACCTTCGCCCCAAGG CCATGGCCTCGCTGGTCCGCTGCCAGAAGGGATGGTGCAAGGTGAAGGCCGACCGGGCCACCGGCTGGGTGCGGGAAGGC GCCCTCTGGGGCACCAACGAGGCGCCGCAATGCCGTTGA
Upstream 100 bases:
>100_bases TGAAAAGGGGGCATGCCCTGCGCCGCGGCCGGCGCAGGCGGATCGATCAGACGAGACCCTTACCAAAGGGGTCACCTGCG GCCAAGGCGAGGCGGACGGC
Downstream 100 bases:
>100_bases GGGGTCCCGCGGGCCTGTGGTAGGGCCAGCCCCCTGACGGTTTCATAGGCCAAGAGAGAGATGCGCGACGTGGCGACCCG GCCCTCCAGCTACACGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKILGAWAAALAAVGLLIGMGAAGAAAAAERATPSGLPVPRYISLKFGKVNARAGPGDDHRLLWVYRARGLPVQVVAETS EWRRICDPEGGLAWVHRRVTDGRRSVMNLQPAAAPLLRKPKAGAETVAYLRPKAMASLVRCQKGWCKVKADRATGWVREG ALWGTNEAPQCR
Sequences:
>Translated_172_residues MKILGAWAAALAAVGLLIGMGAAGAAAAAERATPSGLPVPRYISLKFGKVNARAGPGDDHRLLWVYRARGLPVQVVAETS EWRRICDPEGGLAWVHRRVTDGRRSVMNLQPAAAPLLRKPKAGAETVAYLRPKAMASLVRCQKGWCKVKADRATGWVREG ALWGTNEAPQCR >Mature_172_residues MKILGAWAAALAAVGLLIGMGAAGAAAAAERATPSGLPVPRYISLKFGKVNARAGPGDDHRLLWVYRARGLPVQVVAETS EWRRICDPEGGLAWVHRRVTDGRRSVMNLQPAAAPLLRKPKAGAETVAYLRPKAMASLVRCQKGWCKVKADRATGWVREG ALWGTNEAPQCR
Specific function: Unknown
COG id: COG3807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18461; Mature: 18461
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILGAWAAALAAVGLLIGMGAAGAAAAAERATPSGLPVPRYISLKFGKVNARAGPGDDH CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEEEEECEEECCCCCCCCC RLLWVYRARGLPVQVVAETSEWRRICDPEGGLAWVHRRVTDGRRSVMNLQPAAAPLLRKP EEEEEEECCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCC KAGAETVAYLRPKAMASLVRCQKGWCKVKADRATGWVREGALWGTNEAPQCR CCCCHHHHHHCHHHHHHHHHHHCCCEEEEECCCCCEEECCCEECCCCCCCCC >Mature Secondary Structure MKILGAWAAALAAVGLLIGMGAAGAAAAAERATPSGLPVPRYISLKFGKVNARAGPGDDH CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCEEEEEECEEECCCCCCCCC RLLWVYRARGLPVQVVAETSEWRRICDPEGGLAWVHRRVTDGRRSVMNLQPAAAPLLRKP EEEEEEECCCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCC KAGAETVAYLRPKAMASLVRCQKGWCKVKADRATGWVREGALWGTNEAPQCR CCCCHHHHHHCHHHHHHHHHHHCCCEEEEECCCCCEEECCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA