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The map label for this gene is fabA [H]

Identifier: 197103495

GI number: 197103495

Start: 25204

End: 25731

Strand: Reverse

Name: fabA [H]

Synonym: PHZ_c0029

Alternate gene names: 197103495

Gene position: 25731-25204 (Counterclockwise)

Preceding gene: 197103496

Following gene: 197103494

Centisome position: 0.64

GC content: 68.94

Gene sequence:

>528_bases
ATGCGCGACGTGGCGACCCGGCCCTCCAGCTACACGCTCGACGAGCTCCTGGCCTGCGGCCGGGGCGAAATGTTCGGCGA
CGGCAACGCCCAGCTGCCCGCCCCCCCGATGCTGATGTTCGACCGGATCACGAACATCACCGCCGACGGCGGCGCCCACG
GCAAGGGCTACGTCGAGGCCGAGCTCGATATCCGCGACGACCTGTGGTTCTTCGCCTGCCACTTCATCGGCGACCCCGTG
ATGCCCGGCTGCCTGGGCCTGGACGCCATGTGGCAGCTGGTCGGCTTCTTCCTCGGCTGGTCGGGGGCGCCCGGCAAGGG
CCGCGCCCTGGGCGTCGGCGAGGTGAAGTTCACGGGCCAGGTGACGCCGAAGGTCCAGAAGGTCACCTACAAGATCGACC
TGAAGCGCGTGATCATGCGCAAGCTCGTGATGGGCGTCGGCGACGGGGTTCTGCTCGCCGACGGCAAGCCCATCTATGAG
GCGACGGATCTGCGCGTGGGCCTGTTCCGGGCCGAAGACCTGGCCTGA

Upstream 100 bases:

>100_bases
CGCCCTCTGGGGCACCAACGAGGCGCCGCAATGCCGTTGAGGGGTCCCGCGGGCCTGTGGTAGGGCCAGCCCCCTGACGG
TTTCATAGGCCAAGAGAGAG

Downstream 100 bases:

>100_bases
CGGCCCGACAAAGAGAAGCGTACGGAGGAGACGGCCAGATGCGCCGCGTCGTCATCACGGGGATGGGTATCGTCTCGTCC
ATCGGCAACAACCCGGACGA

Product: 3-hydroxydecanoyl-(acyl carrier protein) dehydratase

Products: NA

Alternate protein names: Beta-hydroxydecanoyl thioester dehydrase [H]

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRDVATRPSSYTLDELLACGRGEMFGDGNAQLPAPPMLMFDRITNITADGGAHGKGYVEAELDIRDDLWFFACHFIGDPV
MPGCLGLDAMWQLVGFFLGWSGAPGKGRALGVGEVKFTGQVTPKVQKVTYKIDLKRVIMRKLVMGVGDGVLLADGKPIYE
ATDLRVGLFRAEDLA

Sequences:

>Translated_175_residues
MRDVATRPSSYTLDELLACGRGEMFGDGNAQLPAPPMLMFDRITNITADGGAHGKGYVEAELDIRDDLWFFACHFIGDPV
MPGCLGLDAMWQLVGFFLGWSGAPGKGRALGVGEVKFTGQVTPKVQKVTYKIDLKRVIMRKLVMGVGDGVLLADGKPIYE
ATDLRVGLFRAEDLA
>Mature_175_residues
MRDVATRPSSYTLDELLACGRGEMFGDGNAQLPAPPMLMFDRITNITADGGAHGKGYVEAELDIRDDLWFFACHFIGDPV
MPGCLGLDAMWQLVGFFLGWSGAPGKGRALGVGEVKFTGQVTPKVQKVTYKIDLKRVIMRKLVMGVGDGVLLADGKPIYE
ATDLRVGLFRAEDLA

Specific function: Necessary for the introduction of cis unsaturation into fatty acids. Catalyzed the dehydration of (3R)-3-hydroxydecanoyl- ACP to E-(2)-decenoyl-ACP and then its isomerization to Z-(3)- decenoyl-ACP [H]

COG id: COG0764

COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioester dehydratase family. FabA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787187, Length=164, Percent_Identity=67.6829268292683, Blast_Score=234, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000794
- InterPro:   IPR010083
- InterPro:   IPR013114 [H]

Pfam domain/function: PF07977 FabA [H]

EC number: =4.2.1.60 [H]

Molecular weight: Translated: 18983; Mature: 18983

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDVATRPSSYTLDELLACGRGEMFGDGNAQLPAPPMLMFDRITNITADGGAHGKGYVEA
CCCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEE
ELDIRDDLWFFACHFIGDPVMPGCLGLDAMWQLVGFFLGWSGAPGKGRALGVGEVKFTGQ
EECCCCCHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEECC
VTPKVQKVTYKIDLKRVIMRKLVMGVGDGVLLADGKPIYEATDLRVGLFRAEDLA
CCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCEEEEEECCCCC
>Mature Secondary Structure
MRDVATRPSSYTLDELLACGRGEMFGDGNAQLPAPPMLMFDRITNITADGGAHGKGYVEA
CCCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEE
ELDIRDDLWFFACHFIGDPVMPGCLGLDAMWQLVGFFLGWSGAPGKGRALGVGEVKFTGQ
EECCCCCHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEECC
VTPKVQKVTYKIDLKRVIMRKLVMGVGDGVLLADGKPIYEATDLRVGLFRAEDLA
CCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA