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The map label for this gene is ypmR [H]

Identifier: 195977761

GI number: 195977761

Start: 648645

End: 649487

Strand: Direct

Name: ypmR [H]

Synonym: Sez_0625

Alternate gene names: 195977761

Gene position: 648645-649487 (Clockwise)

Preceding gene: 195977760

Following gene: 195977762

Centisome position: 32.04

GC content: 38.91

Gene sequence:

>843_bases
ATGAATAAGCGAGGTTTTTTGGGAGGCCTTATCTTCTTTTTCAGTGTTTTTGCCTTATCATTTGTGGTATTAGCTGTCCT
TATTCCAAAGTCTGACCCACAGCTGAAGAAAAGTGATTTTCTAAAAAACAAGAAGATAAGCCTTAATTATATTGCTATCG
GAGACTCCTTGACGGAGGGAGTGGGTGATCTCACCAATCAAGGAGGCTTTGTGCCCTTATTGTCTGGTGATCTTGGAGAC
TACTTTAATGCTACCGTTAATACTGAAAATTACGGTGTTTCCGGTAATACCAGCCAGCAAATTTTAACGAGAATGACTGA
GAATAAGGAGATCACAGAGCAGCTCAAAAAAGCCAATCTCATGACATTGACGGTTGGTGGCAATGATGTCTTGGCTGTTA
TTCGCAAGAACTTGGCTAATCTTAAGGTATCAAGCTTTAAAAAGCCAGCAAGGCAATACCAAGAGCGCTTGCGCAAAATC
CTTGACTTGGCCAGAAAGGATAATCAGGACCTGCCAATCTTTGTTTTAGGCATCTACAATCCTTTTTATTTGAATTTTCA
GGAGCTAACAGAAATGCAGACAGTCATTAATGACTGGAACAAAAAAACACAAGAGGTTGTTGATGACTATGACCATGTTT
ACTTTGTTCCAATTAATGATCTATTGTACAAAGGAGTAGATGGTAAAGAGGGCATTGTCCAGTCAACAGGAGAGCAAACA
ACGATTGTGAATGATGCTTTATTTTCAGGGGATCATTTTCACCCCAATAATACAGGCTATCAAATCATGTCAGACGCAGT
AATGGAGACAATAAGAAAGAATGGAAAAGAAATTAAACCTTAA

Upstream 100 bases:

>100_bases
ACAATCGCTACAGTCTTTGATGGGTCAATTACTGTTTTGGAGACTGGCTCAATCATTCAAACGCATACTGGCGAGGGCGC
TTTTGCGGTGATGGTTAGAT

Downstream 100 bases:

>100_bases
TTGGTGGAAATGGGCTTTTTTGCTATTATTGGCTTTTAATACAGCCTTTTTAGCAGTTATTGGCAGTCGTATCATACAAA
TAAGAGAGCCTAAGTCTGAG

Product: lipase/acylhydrolase with GDSL-like motif

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNKRGFLGGLIFFFSVFALSFVVLAVLIPKSDPQLKKSDFLKNKKISLNYIAIGDSLTEGVGDLTNQGGFVPLLSGDLGD
YFNATVNTENYGVSGNTSQQILTRMTENKEITEQLKKANLMTLTVGGNDVLAVIRKNLANLKVSSFKKPARQYQERLRKI
LDLARKDNQDLPIFVLGIYNPFYLNFQELTEMQTVINDWNKKTQEVVDDYDHVYFVPINDLLYKGVDGKEGIVQSTGEQT
TIVNDALFSGDHFHPNNTGYQIMSDAVMETIRKNGKEIKP

Sequences:

>Translated_280_residues
MNKRGFLGGLIFFFSVFALSFVVLAVLIPKSDPQLKKSDFLKNKKISLNYIAIGDSLTEGVGDLTNQGGFVPLLSGDLGD
YFNATVNTENYGVSGNTSQQILTRMTENKEITEQLKKANLMTLTVGGNDVLAVIRKNLANLKVSSFKKPARQYQERLRKI
LDLARKDNQDLPIFVLGIYNPFYLNFQELTEMQTVINDWNKKTQEVVDDYDHVYFVPINDLLYKGVDGKEGIVQSTGEQT
TIVNDALFSGDHFHPNNTGYQIMSDAVMETIRKNGKEIKP
>Mature_280_residues
MNKRGFLGGLIFFFSVFALSFVVLAVLIPKSDPQLKKSDFLKNKKISLNYIAIGDSLTEGVGDLTNQGGFVPLLSGDLGD
YFNATVNTENYGVSGNTSQQILTRMTENKEITEQLKKANLMTLTVGGNDVLAVIRKNLANLKVSSFKKPARQYQERLRKI
LDLARKDNQDLPIFVLGIYNPFYLNFQELTEMQTVINDWNKKTQEVVDDYDHVYFVPINDLLYKGVDGKEGIVQSTGEQT
TIVNDALFSGDHFHPNNTGYQIMSDAVMETIRKNGKEIKP

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 31433; Mature: 31433

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRGFLGGLIFFFSVFALSFVVLAVLIPKSDPQLKKSDFLKNKKISLNYIAIGDSLTEG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEEECCHHHHH
VGDLTNQGGFVPLLSGDLGDYFNATVNTENYGVSGNTSQQILTRMTENKEITEQLKKANL
HHHHCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCE
MTLTVGGNDVLAVIRKNLANLKVSSFKKPARQYQERLRKILDLARKDNQDLPIFVLGIYN
EEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
PFYLNFQELTEMQTVINDWNKKTQEVVDDYDHVYFVPINDLLYKGVDGKEGIVQSTGEQT
CEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCHHHCCCCCE
TIVNDALFSGDHFHPNNTGYQIMSDAVMETIRKNGKEIKP
EEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKRGFLGGLIFFFSVFALSFVVLAVLIPKSDPQLKKSDFLKNKKISLNYIAIGDSLTEG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEEECCHHHHH
VGDLTNQGGFVPLLSGDLGDYFNATVNTENYGVSGNTSQQILTRMTENKEITEQLKKANL
HHHHCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCE
MTLTVGGNDVLAVIRKNLANLKVSSFKKPARQYQERLRKILDLARKDNQDLPIFVLGIYN
EEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
PFYLNFQELTEMQTVINDWNKKTQEVVDDYDHVYFVPINDLLYKGVDGKEGIVQSTGEQT
CEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCHHHCCCCCE
TIVNDALFSGDHFHPNNTGYQIMSDAVMETIRKNGKEIKP
EEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3145906 [H]