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The map label for this gene is ypmS [H]

Identifier: 195977762

GI number: 195977762

Start: 649465

End: 650052

Strand: Direct

Name: ypmS [H]

Synonym: Sez_0626

Alternate gene names: 195977762

Gene position: 649465-650052 (Clockwise)

Preceding gene: 195977761

Following gene: 195977763

Centisome position: 32.09

GC content: 37.59

Gene sequence:

>588_bases
ATGGAAAAGAAATTAAACCTTAATTGGTGGAAATGGGCTTTTTTGCTATTATTGGCTTTTAATACAGCCTTTTTAGCAGT
TATTGGCAGTCGTATCATACAAATAAGAGAGCCTAAGTCTGAGCTGATCAATCAAAAAGCAGCAAAGAATATTAAAATAG
GGACCTTAACAACCACTAAAGAGCAATTAAATGAAGCAGTCGTCAGCTACCTAAAGGATTTCCAGACGAAAAAAATGACC
TATAAGGTGTATGCCACTTCCTCGACCATTCTCTTTGAAGGAACCTATCAGCTCTTAGGATATGAGGTGCCTCTATACAT
TTATTTTCAGCCTCATCGCCTAACCAATGGTGCGATACAGCTGCAGGTTCTCTCCTTTTCTGTGGGGACCCTTTCTTTGC
CGGAAAAGGACGTTTTGCAATACTTGAAATCCAGCTATAAGCTGCCAAAATTCGTTGAAGTCTTACCTAAGCAATCAGCT
ATTATTATCAATCTACAGCAATTGGAAAATGATGCCAACATCTATTTAAAGGCTCAAAAGATTGATCTTGTCAAGGATGA
TATTCGATTTGACATCTATAAGAAATGA

Upstream 100 bases:

>100_bases
ACGATTGTGAATGATGCTTTATTTTCAGGGGATCATTTTCACCCCAATAATACAGGCTATCAAATCATGTCAGACGCAGT
AATGGAGACAATAAGAAAGA

Downstream 100 bases:

>100_bases
GTCTAACTAACGTTTAATACTTGACCTGTGGCTGTTTTTTAGATATGATAATATCTGTTAAAGCGTTAAGCTTACTAATT
ATTTGGAGGATTGTTAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MEKKLNLNWWKWAFLLLLAFNTAFLAVIGSRIIQIREPKSELINQKAAKNIKIGTLTTTKEQLNEAVVSYLKDFQTKKMT
YKVYATSSTILFEGTYQLLGYEVPLYIYFQPHRLTNGAIQLQVLSFSVGTLSLPEKDVLQYLKSSYKLPKFVEVLPKQSA
IIINLQQLENDANIYLKAQKIDLVKDDIRFDIYKK

Sequences:

>Translated_195_residues
MEKKLNLNWWKWAFLLLLAFNTAFLAVIGSRIIQIREPKSELINQKAAKNIKIGTLTTTKEQLNEAVVSYLKDFQTKKMT
YKVYATSSTILFEGTYQLLGYEVPLYIYFQPHRLTNGAIQLQVLSFSVGTLSLPEKDVLQYLKSSYKLPKFVEVLPKQSA
IIINLQQLENDANIYLKAQKIDLVKDDIRFDIYKK
>Mature_195_residues
MEKKLNLNWWKWAFLLLLAFNTAFLAVIGSRIIQIREPKSELINQKAAKNIKIGTLTTTKEQLNEAVVSYLKDFQTKKMT
YKVYATSSTILFEGTYQLLGYEVPLYIYFQPHRLTNGAIQLQVLSFSVGTLSLPEKDVLQYLKSSYKLPKFVEVLPKQSA
IIINLQQLENDANIYLKAQKIDLVKDDIRFDIYKK

Specific function: Unknown

COG id: COG4698

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018672 [H]

Pfam domain/function: PF09911 DUF2140 [H]

EC number: NA

Molecular weight: Translated: 22576; Mature: 22576

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKLNLNWWKWAFLLLLAFNTAFLAVIGSRIIQIREPKSELINQKAAKNIKIGTLTTTK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCEEEEEEECCH
EQLNEAVVSYLKDFQTKKMTYKVYATSSTILFEGTYQLLGYEVPLYIYFQPHRLTNGAIQ
HHHHHHHHHHHHHHHHCCEEEEEEEECCEEEEECCHHHCCEECCEEEEEECCEECCCEEE
LQVLSFSVGTLSLPEKDVLQYLKSSYKLPKFVEVLPKQSAIIINLQQLENDANIYLKAQK
EEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEEEEE
IDLVKDDIRFDIYKK
ECEECCCCEEEEECC
>Mature Secondary Structure
MEKKLNLNWWKWAFLLLLAFNTAFLAVIGSRIIQIREPKSELINQKAAKNIKIGTLTTTK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCEEEEEEECCH
EQLNEAVVSYLKDFQTKKMTYKVYATSSTILFEGTYQLLGYEVPLYIYFQPHRLTNGAIQ
HHHHHHHHHHHHHHHHCCEEEEEEEECCEEEEECCHHHCCEECCEEEEEECCEECCCEEE
LQVLSFSVGTLSLPEKDVLQYLKSSYKLPKFVEVLPKQSAIIINLQQLENDANIYLKAQK
EEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCCCCEEEEEEEE
IDLVKDDIRFDIYKK
ECEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]