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The map label for this gene is 195977760

Identifier: 195977760

GI number: 195977760

Start: 647801

End: 648652

Strand: Direct

Name: 195977760

Synonym: Sez_0624

Alternate gene names: NA

Gene position: 647801-648652 (Clockwise)

Preceding gene: 195977759

Following gene: 195977761

Centisome position: 32.0

GC content: 45.54

Gene sequence:

>852_bases
ATGGAACTTAAGATGGGAACTATTAAAATTGTTGCAGATTCATCAATGACGATTGAACCAGAGCTAATCAAATCTCTTGA
TATTACGGTTGTACCGCTTTCTGTCATGATTGATAGCAAGCTGTATTCTGATAATGAGCTAAAAGAGGAAGGGCAATTTC
TACAGCTGATGAGAGCTAGTAAGTCATTGCCAAAAACTAGTCAGCCACCGGTAGGGCTTTTTGCAGATATTTATGAGCGA
TTGGTCAAGGAGGGGGCGACAGCTATTGTTGCCATTCACCTCTCACCAGCTCTTTCAGGAACAATTGAGGCATCACGTCA
GGGAGCTGAAATCGCAGCAGCACCAGTTACGGTATTGGACTCAGGCTTTACAGATCAGGCTTTGAAGTTTCAGGTGGTTG
AGGCGGCTAGACTGGCTCAGGCTGGCGCTAGCCTTGAGGAAATCCTTGAGGCAGTAGAGAGTATTAAACGAAAGACAGAG
CTTTACATAGGGGTGTCAACGCTTGAGCATTTGGTTAAGGGGGGACGAATTGGTCGTGTGACAGGTCTGCTTAGCTCCTT
GCTGAACATTCGTGTGGTCATGGAAATGAAAAATGATACCCTGCAAACACTTGTTAAAGGACGCGGTAATAAGACCTTTA
CCAAATGGCTGGATAGCTACCTAGCAGAAAATAGCCAGCGACAGATAGCTGAGGTGGCCATTTCCTATGCTGGGCAAAGG
GATTTTGCTGATGGCCTGAAGCAGACAATCGCTACAGTCTTTGATGGGTCAATTACTGTTTTGGAGACTGGCTCAATCAT
TCAAACGCATACTGGCGAGGGCGCTTTTGCGGTGATGGTTAGATATGAATAA

Upstream 100 bases:

>100_bases
GTTTTTGACAGATGTTTTAGCTAACACCAAGAGCTAGATACCAGCTTTGCTTTATTTTTAAAGGAGTGATAAAATAAAGA
GACGATAAATGAGGTTAGAA

Downstream 100 bases:

>100_bases
GCGAGGTTTTTTGGGAGGCCTTATCTTCTTTTTCAGTGTTTTTGCCTTATCATTTGTGGTATTAGCTGTCCTTATTCCAA
AGTCTGACCCACAGCTGAAG

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MELKMGTIKIVADSSMTIEPELIKSLDITVVPLSVMIDSKLYSDNELKEEGQFLQLMRASKSLPKTSQPPVGLFADIYER
LVKEGATAIVAIHLSPALSGTIEASRQGAEIAAAPVTVLDSGFTDQALKFQVVEAARLAQAGASLEEILEAVESIKRKTE
LYIGVSTLEHLVKGGRIGRVTGLLSSLLNIRVVMEMKNDTLQTLVKGRGNKTFTKWLDSYLAENSQRQIAEVAISYAGQR
DFADGLKQTIATVFDGSITVLETGSIIQTHTGEGAFAVMVRYE

Sequences:

>Translated_283_residues
MELKMGTIKIVADSSMTIEPELIKSLDITVVPLSVMIDSKLYSDNELKEEGQFLQLMRASKSLPKTSQPPVGLFADIYER
LVKEGATAIVAIHLSPALSGTIEASRQGAEIAAAPVTVLDSGFTDQALKFQVVEAARLAQAGASLEEILEAVESIKRKTE
LYIGVSTLEHLVKGGRIGRVTGLLSSLLNIRVVMEMKNDTLQTLVKGRGNKTFTKWLDSYLAENSQRQIAEVAISYAGQR
DFADGLKQTIATVFDGSITVLETGSIIQTHTGEGAFAVMVRYE
>Mature_283_residues
MELKMGTIKIVADSSMTIEPELIKSLDITVVPLSVMIDSKLYSDNELKEEGQFLQLMRASKSLPKTSQPPVGLFADIYER
LVKEGATAIVAIHLSPALSGTIEASRQGAEIAAAPVTVLDSGFTDQALKFQVVEAARLAQAGASLEEILEAVESIKRKTE
LYIGVSTLEHLVKGGRIGRVTGLLSSLLNIRVVMEMKNDTLQTLVKGRGNKTFTKWLDSYLAENSQRQIAEVAISYAGQR
DFADGLKQTIATVFDGSITVLETGSIIQTHTGEGAFAVMVRYE

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30663; Mature: 30663

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKMGTIKIVADSSMTIEPELIKSLDITVVPLSVMIDSKLYSDNELKEEGQFLQLMRAS
CCCCCCEEEEEECCCCEECHHHHHHCCEEEEEHHHEECCHHCCCCHHHHHHHHHHHHHHH
KSLPKTSQPPVGLFADIYERLVKEGATAIVAIHLSPALSGTIEASRQGAEIAAAPVTVLD
HCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHCCCCCEEEECCHHEEC
SGFTDQALKFQVVEAARLAQAGASLEEILEAVESIKRKTELYIGVSTLEHLVKGGRIGRV
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCCCCHHH
TGLLSSLLNIRVVMEMKNDTLQTLVKGRGNKTFTKWLDSYLAENSQRQIAEVAISYAGQR
HHHHHHHHHEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCH
DFADGLKQTIATVFDGSITVLETGSIIQTHTGEGAFAVMVRYE
HHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCEEEEEEEEC
>Mature Secondary Structure
MELKMGTIKIVADSSMTIEPELIKSLDITVVPLSVMIDSKLYSDNELKEEGQFLQLMRAS
CCCCCCEEEEEECCCCEECHHHHHHCCEEEEEHHHEECCHHCCCCHHHHHHHHHHHHHHH
KSLPKTSQPPVGLFADIYERLVKEGATAIVAIHLSPALSGTIEASRQGAEIAAAPVTVLD
HCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHCCCCCEEEECCHHEEC
SGFTDQALKFQVVEAARLAQAGASLEEILEAVESIKRKTELYIGVSTLEHLVKGGRIGRV
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCCCCHHH
TGLLSSLLNIRVVMEMKNDTLQTLVKGRGNKTFTKWLDSYLAENSQRQIAEVAISYAGQR
HHHHHHHHHEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCH
DFADGLKQTIATVFDGSITVLETGSIIQTHTGEGAFAVMVRYE
HHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]