Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952561

Identifier: 195952561

GI number: 195952561

Start: 162477

End: 162947

Strand: Direct

Name: 195952561

Synonym: HY04AAS1_0181

Alternate gene names: NA

Gene position: 162477-162947 (Clockwise)

Preceding gene: 195952554

Following gene: 195952562

Centisome position: 10.42

GC content: 36.31

Gene sequence:

>471_bases
ATGCTTTGCAGTGATATAATTAAAATTATGAAAAAGTTTTTTTGTATATCATGTTTACTTAGTTTTTTGGCTTTTGGTGA
AAATGTGCAAATTGTCCAACAACCTATACAACCTTCCCAAAACGCTAATCCACCCCAAGCCAATACATCTTCTCCCGCCC
AGGCACCATCTAACTCTCAATCTTCAAATTCTCAAAATCAATGTCCTACCGAAGATGCTATAAAAGGATATCTCGTATCC
CAGAATTTAGCCACATATACGATATTGGCTATTGTTCCCTCCCAATCTGTGCCAGGATATTGTGATGTTATACTAAAGAG
CATGAACAACAAGACATTTTTTATTAGAATAAGAAACGATATGGCTTACGTTATATCTGGAAGCGTTGTCAATACAACTA
CTGGCAAGGTGCAAGTACCAGATATGAGCAAATTTAACACCACAGACAACACTACAAACAATCAGCAATGA

Upstream 100 bases:

>100_bases
ATCTTTTATATCTATTGTGTGCTCTTTTATAAAGATAGATACATCAATTTTCCCCTCAATGGTTTCTTTCGTTAAGTCCA
TAGCCTAATTTTAACAAAAT

Downstream 100 bases:

>100_bases
TATCTTCTTTTGTAATAACGGGGTTTTTAGGTGCTGGTAAAACTACTTTTATGCTAAAAGCTGTAAAAGAGCATTTTAAA
GATAAAAAAGTAGCTGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLCSDIIKIMKKFFCISCLLSFLAFGENVQIVQQPIQPSQNANPPQANTSSPAQAPSNSQSSNSQNQCPTEDAIKGYLVS
QNLATYTILAIVPSQSVPGYCDVILKSMNNKTFFIRIRNDMAYVISGSVVNTTTGKVQVPDMSKFNTTDNTTNNQQ

Sequences:

>Translated_156_residues
MLCSDIIKIMKKFFCISCLLSFLAFGENVQIVQQPIQPSQNANPPQANTSSPAQAPSNSQSSNSQNQCPTEDAIKGYLVS
QNLATYTILAIVPSQSVPGYCDVILKSMNNKTFFIRIRNDMAYVISGSVVNTTTGKVQVPDMSKFNTTDNTTNNQQ
>Mature_156_residues
MLCSDIIKIMKKFFCISCLLSFLAFGENVQIVQQPIQPSQNANPPQANTSSPAQAPSNSQSSNSQNQCPTEDAIKGYLVS
QNLATYTILAIVPSQSVPGYCDVILKSMNNKTFFIRIRNDMAYVISGSVVNTTTGKVQVPDMSKFNTTDNTTNNQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17051; Mature: 17051

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCSDIIKIMKKFFCISCLLSFLAFGENVQIVQQPIQPSQNANPPQANTSSPAQAPSNSQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSNSQNQCPTEDAIKGYLVSQNLATYTILAIVPSQSVPGYCDVILKSMNNKTFFIRIRND
CCCCCCCCCCHHHHHEEHCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCC
MAYVISGSVVNTTTGKVQVPDMSKFNTTDNTTNNQQ
EEEEEECCEEECCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLCSDIIKIMKKFFCISCLLSFLAFGENVQIVQQPIQPSQNANPPQANTSSPAQAPSNSQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSNSQNQCPTEDAIKGYLVSQNLATYTILAIVPSQSVPGYCDVILKSMNNKTFFIRIRND
CCCCCCCCCCHHHHHEEHCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCC
MAYVISGSVVNTTTGKVQVPDMSKFNTTDNTTNNQQ
EEEEEECCEEECCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA