| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952444
Identifier: 195952444
GI number: 195952444
Start: 60800
End: 61264
Strand: Direct
Name: 195952444
Synonym: HY04AAS1_0064
Alternate gene names: NA
Gene position: 60800-61264 (Clockwise)
Preceding gene: 195952438
Following gene: 195952445
Centisome position: 3.9
GC content: 33.55
Gene sequence:
>465_bases ATGTCCAGTCTAGATAGAGATGCTTTGTATAGGCTTGATATATTGGTTAGGCATTGTGAGGATATCTTAAGCAAACTGGA TAGTATTAAAGAACAACTTAACAATGATAGTTTATTAGATAGGCTTGTAGAAGGCGTACGCATGCATGAATTGTATATAT TAAATTTTAAAAAGTTTTTAAACAGTGAGATTGATTGGATACCGCCAAAATATACACAATGCAATTTTGGCAAGATATAC TACAGCATTGATAAAAGCTATATTTCAAAGACTTACGGAGAAGCTGCTGCTTCTATGTTTGAAAGAATTGGCAATATTCA TATGAGTTTTCACGAAACCACTGAGGAATGTCTTAAGCGTAAAAGTAACTATGAAGTTAAAATGCTAATCGTAGAGTTGG CTTCCAAAAGTAGTATGTTGGTAGATATGGTGTTGAGGCTATCGGCAACAATGTCAAGAAACTAA
Upstream 100 bases:
>100_bases GCCGCCTCCACCATAATAATAAACAACAGACTGTAAGATCTTAACCAAAAATTAAGAAAAATAGAATATAATAATGTCTA AATTAATTAGGAGGGTCATT
Downstream 100 bases:
>100_bases GATAAGCCAAAGCTTATAGAAAAATAACAATTTTTCATAGCACAAACAATCTCAATAGGTTAAAATAAAAGATATTAGCT ATTTGGAGGTAAAATAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSSLDRDALYRLDILVRHCEDILSKLDSIKEQLNNDSLLDRLVEGVRMHELYILNFKKFLNSEIDWIPPKYTQCNFGKIY YSIDKSYISKTYGEAAASMFERIGNIHMSFHETTEECLKRKSNYEVKMLIVELASKSSMLVDMVLRLSATMSRN
Sequences:
>Translated_154_residues MSSLDRDALYRLDILVRHCEDILSKLDSIKEQLNNDSLLDRLVEGVRMHELYILNFKKFLNSEIDWIPPKYTQCNFGKIY YSIDKSYISKTYGEAAASMFERIGNIHMSFHETTEECLKRKSNYEVKMLIVELASKSSMLVDMVLRLSATMSRN >Mature_153_residues SSLDRDALYRLDILVRHCEDILSKLDSIKEQLNNDSLLDRLVEGVRMHELYILNFKKFLNSEIDWIPPKYTQCNFGKIYY SIDKSYISKTYGEAAASMFERIGNIHMSFHETTEECLKRKSNYEVKMLIVELASKSSMLVDMVLRLSATMSRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18003; Mature: 17872
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLDRDALYRLDILVRHCEDILSKLDSIKEQLNNDSLLDRLVEGVRMHELYILNFKKFL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH NSEIDWIPPKYTQCNFGKIYYSIDKSYISKTYGEAAASMFERIGNIHMSFHETTEECLKR CCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KSNYEVKMLIVELASKSSMLVDMVLRLSATMSRN CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSLDRDALYRLDILVRHCEDILSKLDSIKEQLNNDSLLDRLVEGVRMHELYILNFKKFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH NSEIDWIPPKYTQCNFGKIYYSIDKSYISKTYGEAAASMFERIGNIHMSFHETTEECLKR CCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KSNYEVKMLIVELASKSSMLVDMVLRLSATMSRN CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA