| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952438
Identifier: 195952438
GI number: 195952438
Start: 53808
End: 54536
Strand: Direct
Name: 195952438
Synonym: HY04AAS1_0058
Alternate gene names: NA
Gene position: 53808-54536 (Clockwise)
Preceding gene: 195952436
Following gene: 195952444
Centisome position: 3.45
GC content: 39.23
Gene sequence:
>729_bases ATGAAAAAGATATGTAGAGTAGCATGGAGCATAACTCATCAAGAGTTTACGGTGACGGATTATTATTATTTTTCTATTAT TGAGAAAAGAGCCCCAGAGTTTGGGCTTCAGATTGACGAAGTGGATTCGTGGGATAAGCTTTTTGAATACGATACGATAG TGTTTAACTATCCAGAGATTCCATTCACTGAAAAAGAAGTCCAAGATGTTGTAAAAGCGGTGGAAGAGCTTGGCAAGAAG GTGATACTGCTTGGTTATTACAAAAACGAAGACCATATAGCAGACACTTGCAACACGTTGGCAAGGGCTTTTGGCATGGA GCTAAACCCAGATGAAATAACGGATGAAGTATCAAATTACGACGGAGATAAGTATTTTGTTAAAAGCACAAAGGTAAGAA GATACAACAAAGGCTTAGACAACAAGGTAAATGTTAACGCTGTAGTGCTTCCTTGTACGTGCTCTATAAAAACCATAATG CCAGATATAAAGATAGTGGTGGCTGGAGAGGAAACTGCAAAATCAAATATGGAAAACTACCCTCTTTTGATAGCGGATCA TATTGCACCAGTAAGCGGTGGATATTTTACACTGGCTGGCACTTGCGTGTTTTGGGACAATTACGCTATGAGGCTTGAAG ATAATCTAAACTTTGCTATGAACATGCTTTGGCATGAAACACCACCTCAAGACAAAGAAAACGCCAAAGCTGTAAGGTTT GGTCTTTGA
Upstream 100 bases:
>100_bases AGGATGGCATCTCCATATGAAAAGCTAAAAAACAAAAGTATAAAAATTAAAAATCTCATATTATAAATATAAAACTTTTG ATATGTGTTATAATAAAATC
Downstream 100 bases:
>100_bases TATATTAAAAGGCGACGAGCGGATTTGAACCGCTGTAGAGGGGATTTGCAGTCCCGCGCCTCGCCTCTCGGCCACGTCGC CTAAATAAGCTGATTCTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKKICRVAWSITHQEFTVTDYYYFSIIEKRAPEFGLQIDEVDSWDKLFEYDTIVFNYPEIPFTEKEVQDVVKAVEELGKK VILLGYYKNEDHIADTCNTLARAFGMELNPDEITDEVSNYDGDKYFVKSTKVRRYNKGLDNKVNVNAVVLPCTCSIKTIM PDIKIVVAGEETAKSNMENYPLLIADHIAPVSGGYFTLAGTCVFWDNYAMRLEDNLNFAMNMLWHETPPQDKENAKAVRF GL
Sequences:
>Translated_242_residues MKKICRVAWSITHQEFTVTDYYYFSIIEKRAPEFGLQIDEVDSWDKLFEYDTIVFNYPEIPFTEKEVQDVVKAVEELGKK VILLGYYKNEDHIADTCNTLARAFGMELNPDEITDEVSNYDGDKYFVKSTKVRRYNKGLDNKVNVNAVVLPCTCSIKTIM PDIKIVVAGEETAKSNMENYPLLIADHIAPVSGGYFTLAGTCVFWDNYAMRLEDNLNFAMNMLWHETPPQDKENAKAVRF GL >Mature_242_residues MKKICRVAWSITHQEFTVTDYYYFSIIEKRAPEFGLQIDEVDSWDKLFEYDTIVFNYPEIPFTEKEVQDVVKAVEELGKK VILLGYYKNEDHIADTCNTLARAFGMELNPDEITDEVSNYDGDKYFVKSTKVRRYNKGLDNKVNVNAVVLPCTCSIKTIM PDIKIVVAGEETAKSNMENYPLLIADHIAPVSGGYFTLAGTCVFWDNYAMRLEDNLNFAMNMLWHETPPQDKENAKAVRF GL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27806; Mature: 27806
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKICRVAWSITHQEFTVTDYYYFSIIEKRAPEFGLQIDEVDSWDKLFEYDTIVFNYPEI CCHHHHHHHHCCCCEEEEEHHHEEHHHHHCCCHHCCEECCCCCHHHHHHHCEEEEECCCC PFTEKEVQDVVKAVEELGKKVILLGYYKNEDHIADTCNTLARAFGMELNPDEITDEVSNY CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC DGDKYFVKSTKVRRYNKGLDNKVNVNAVVLPCTCSIKTIMPDIKIVVAGEETAKSNMENY CCCEEEEECCHHHHHHCCCCCCCCCEEEEEEECCCCEECCCCEEEEEECCHHHHCCCCCC PLLIADHIAPVSGGYFTLAGTCVFWDNYAMRLEDNLNFAMNMLWHETPPQDKENAKAVRF CEEEEECCCCCCCCEEEEEEEEEEECCEEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEE GL CC >Mature Secondary Structure MKKICRVAWSITHQEFTVTDYYYFSIIEKRAPEFGLQIDEVDSWDKLFEYDTIVFNYPEI CCHHHHHHHHCCCCEEEEEHHHEEHHHHHCCCHHCCEECCCCCHHHHHHHCEEEEECCCC PFTEKEVQDVVKAVEELGKKVILLGYYKNEDHIADTCNTLARAFGMELNPDEITDEVSNY CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC DGDKYFVKSTKVRRYNKGLDNKVNVNAVVLPCTCSIKTIMPDIKIVVAGEETAKSNMENY CCCEEEEECCHHHHHHCCCCCCCCCEEEEEEECCCCEECCCCEEEEEECCHHHHCCCCCC PLLIADHIAPVSGGYFTLAGTCVFWDNYAMRLEDNLNFAMNMLWHETPPQDKENAKAVRF CEEEEECCCCCCCCEEEEEEEEEEECCEEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEE GL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]