Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952438

Identifier: 195952438

GI number: 195952438

Start: 53808

End: 54536

Strand: Direct

Name: 195952438

Synonym: HY04AAS1_0058

Alternate gene names: NA

Gene position: 53808-54536 (Clockwise)

Preceding gene: 195952436

Following gene: 195952444

Centisome position: 3.45

GC content: 39.23

Gene sequence:

>729_bases
ATGAAAAAGATATGTAGAGTAGCATGGAGCATAACTCATCAAGAGTTTACGGTGACGGATTATTATTATTTTTCTATTAT
TGAGAAAAGAGCCCCAGAGTTTGGGCTTCAGATTGACGAAGTGGATTCGTGGGATAAGCTTTTTGAATACGATACGATAG
TGTTTAACTATCCAGAGATTCCATTCACTGAAAAAGAAGTCCAAGATGTTGTAAAAGCGGTGGAAGAGCTTGGCAAGAAG
GTGATACTGCTTGGTTATTACAAAAACGAAGACCATATAGCAGACACTTGCAACACGTTGGCAAGGGCTTTTGGCATGGA
GCTAAACCCAGATGAAATAACGGATGAAGTATCAAATTACGACGGAGATAAGTATTTTGTTAAAAGCACAAAGGTAAGAA
GATACAACAAAGGCTTAGACAACAAGGTAAATGTTAACGCTGTAGTGCTTCCTTGTACGTGCTCTATAAAAACCATAATG
CCAGATATAAAGATAGTGGTGGCTGGAGAGGAAACTGCAAAATCAAATATGGAAAACTACCCTCTTTTGATAGCGGATCA
TATTGCACCAGTAAGCGGTGGATATTTTACACTGGCTGGCACTTGCGTGTTTTGGGACAATTACGCTATGAGGCTTGAAG
ATAATCTAAACTTTGCTATGAACATGCTTTGGCATGAAACACCACCTCAAGACAAAGAAAACGCCAAAGCTGTAAGGTTT
GGTCTTTGA

Upstream 100 bases:

>100_bases
AGGATGGCATCTCCATATGAAAAGCTAAAAAACAAAAGTATAAAAATTAAAAATCTCATATTATAAATATAAAACTTTTG
ATATGTGTTATAATAAAATC

Downstream 100 bases:

>100_bases
TATATTAAAAGGCGACGAGCGGATTTGAACCGCTGTAGAGGGGATTTGCAGTCCCGCGCCTCGCCTCTCGGCCACGTCGC
CTAAATAAGCTGATTCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKKICRVAWSITHQEFTVTDYYYFSIIEKRAPEFGLQIDEVDSWDKLFEYDTIVFNYPEIPFTEKEVQDVVKAVEELGKK
VILLGYYKNEDHIADTCNTLARAFGMELNPDEITDEVSNYDGDKYFVKSTKVRRYNKGLDNKVNVNAVVLPCTCSIKTIM
PDIKIVVAGEETAKSNMENYPLLIADHIAPVSGGYFTLAGTCVFWDNYAMRLEDNLNFAMNMLWHETPPQDKENAKAVRF
GL

Sequences:

>Translated_242_residues
MKKICRVAWSITHQEFTVTDYYYFSIIEKRAPEFGLQIDEVDSWDKLFEYDTIVFNYPEIPFTEKEVQDVVKAVEELGKK
VILLGYYKNEDHIADTCNTLARAFGMELNPDEITDEVSNYDGDKYFVKSTKVRRYNKGLDNKVNVNAVVLPCTCSIKTIM
PDIKIVVAGEETAKSNMENYPLLIADHIAPVSGGYFTLAGTCVFWDNYAMRLEDNLNFAMNMLWHETPPQDKENAKAVRF
GL
>Mature_242_residues
MKKICRVAWSITHQEFTVTDYYYFSIIEKRAPEFGLQIDEVDSWDKLFEYDTIVFNYPEIPFTEKEVQDVVKAVEELGKK
VILLGYYKNEDHIADTCNTLARAFGMELNPDEITDEVSNYDGDKYFVKSTKVRRYNKGLDNKVNVNAVVLPCTCSIKTIM
PDIKIVVAGEETAKSNMENYPLLIADHIAPVSGGYFTLAGTCVFWDNYAMRLEDNLNFAMNMLWHETPPQDKENAKAVRF
GL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27806; Mature: 27806

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKICRVAWSITHQEFTVTDYYYFSIIEKRAPEFGLQIDEVDSWDKLFEYDTIVFNYPEI
CCHHHHHHHHCCCCEEEEEHHHEEHHHHHCCCHHCCEECCCCCHHHHHHHCEEEEECCCC
PFTEKEVQDVVKAVEELGKKVILLGYYKNEDHIADTCNTLARAFGMELNPDEITDEVSNY
CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
DGDKYFVKSTKVRRYNKGLDNKVNVNAVVLPCTCSIKTIMPDIKIVVAGEETAKSNMENY
CCCEEEEECCHHHHHHCCCCCCCCCEEEEEEECCCCEECCCCEEEEEECCHHHHCCCCCC
PLLIADHIAPVSGGYFTLAGTCVFWDNYAMRLEDNLNFAMNMLWHETPPQDKENAKAVRF
CEEEEECCCCCCCCEEEEEEEEEEECCEEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEE
GL
CC
>Mature Secondary Structure
MKKICRVAWSITHQEFTVTDYYYFSIIEKRAPEFGLQIDEVDSWDKLFEYDTIVFNYPEI
CCHHHHHHHHCCCCEEEEEHHHEEHHHHHCCCHHCCEECCCCCHHHHHHHCEEEEECCCC
PFTEKEVQDVVKAVEELGKKVILLGYYKNEDHIADTCNTLARAFGMELNPDEITDEVSNY
CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
DGDKYFVKSTKVRRYNKGLDNKVNVNAVVLPCTCSIKTIMPDIKIVVAGEETAKSNMENY
CCCEEEEECCHHHHHHCCCCCCCCCEEEEEEECCCCEECCCCEEEEEECCHHHHCCCCCC
PLLIADHIAPVSGGYFTLAGTCVFWDNYAMRLEDNLNFAMNMLWHETPPQDKENAKAVRF
CEEEEECCCCCCCCEEEEEEEEEEECCEEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEE
GL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]