| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is ilvC
Identifier: 195952445
GI number: 195952445
Start: 61362
End: 62363
Strand: Direct
Name: ilvC
Synonym: HY04AAS1_0065
Alternate gene names: 195952445
Gene position: 61362-62363 (Clockwise)
Preceding gene: 195952444
Following gene: 195952446
Centisome position: 3.93
GC content: 39.72
Gene sequence:
>1002_bases ATGGCGAAAATTTACTACGACGAAGATGCATCTTTGGGTATCTTGGCTATGAAAACTGTAGCCATAGTGGGTTATGGTTC TCAAGGACACGCTCATGCTTTAAATCTAAGAGACAGTGGTATTAGGGTTATAGTGGCTTTAGACGATAAAAGTCCTCATA GAAAAACTGCTATGGAAGATGGTTTTAGCGTATATACCACCTCTAGAGCAACTCAAGAGGCCGATGTGATAATGATATTA ACACCAGACACGGTTCAACCAGCTGTATATAAAGAATGCATAGAACCTAATTTAACACCTGGAAAAGCTATAGCCTTTGC CCATGGTTTTAACATACATTTTGGTCAAATAGTGCCACCAAAAGATATAGATGTATTTATGGTGGCTCCAAAAGGACCAG GCCATTTGGTAAGATGGATGTACGAAGAGGGAAAAGGAGTACCAGCTCTTATATCTATACATCAAGATGCTACAGGTTCT TGTAGAGATATAGCCTTAGCTTATGCAAAAGGCATAGGTGCTACAAGGGCTGGGGTTATAGAAACCACGTTTAGAGAAGA AACGGAAACAGACTTATTTGGTGAGCAAGCGGTGCTTTGTGGTGGTGCTACAGCCCTTATAAAAGCTGGTTTTGAAACGC TTGTAGAGGCCGGTTATCAACCAGAGATGGCTTATTTTGAATGTCTTCATGAGTTAAAGCTAATAGTAGACCTCATATAC CAACACGGCATAGCTGGTATGAGATATTCTATATCAGATACCGCAAAATATGGCGATGTAACAAGAGGTGATAGAGTATA CGAAGCTGTCAAACCTCTTATGAAACAGATGCTCAAAGAAATTCAAGATGGTGAGTTTGCCAGAGAATGGATATTGGAAA ATCAAGCCAACAGACCAGTTTACAACGCTCTTTTAAATAAGGATAAAGAACATTTGGTGGAAAAAGTTGGTAAAGAGCTA AGACAGATGATGCCGTGGCTATCTGGTAAAGAGTTAAAATGA
Upstream 100 bases:
>100_bases TAAGATAAGCCAAAGCTTATAGAAAAATAACAATTTTTCATAGCACAAACAATCTCAATAGGTTAAAATAAAAGATATTA GCTATTTGGAGGTAAAATAA
Downstream 100 bases:
>100_bases ATCTTACCAAAAAACGTTATAAACTAAAAAAGTTTTACGCTCCCATGGGGCATGTGTTTGTAAAGATGCACATGTCCCCA AACGTAATAACCCTTTTGTC
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MAKIYYDEDASLGILAMKTVAIVGYGSQGHAHALNLRDSGIRVIVALDDKSPHRKTAMEDGFSVYTTSRATQEADVIMIL TPDTVQPAVYKECIEPNLTPGKAIAFAHGFNIHFGQIVPPKDIDVFMVAPKGPGHLVRWMYEEGKGVPALISIHQDATGS CRDIALAYAKGIGATRAGVIETTFREETETDLFGEQAVLCGGATALIKAGFETLVEAGYQPEMAYFECLHELKLIVDLIY QHGIAGMRYSISDTAKYGDVTRGDRVYEAVKPLMKQMLKEIQDGEFAREWILENQANRPVYNALLNKDKEHLVEKVGKEL RQMMPWLSGKELK
Sequences:
>Translated_333_residues MAKIYYDEDASLGILAMKTVAIVGYGSQGHAHALNLRDSGIRVIVALDDKSPHRKTAMEDGFSVYTTSRATQEADVIMIL TPDTVQPAVYKECIEPNLTPGKAIAFAHGFNIHFGQIVPPKDIDVFMVAPKGPGHLVRWMYEEGKGVPALISIHQDATGS CRDIALAYAKGIGATRAGVIETTFREETETDLFGEQAVLCGGATALIKAGFETLVEAGYQPEMAYFECLHELKLIVDLIY QHGIAGMRYSISDTAKYGDVTRGDRVYEAVKPLMKQMLKEIQDGEFAREWILENQANRPVYNALLNKDKEHLVEKVGKEL RQMMPWLSGKELK >Mature_332_residues AKIYYDEDASLGILAMKTVAIVGYGSQGHAHALNLRDSGIRVIVALDDKSPHRKTAMEDGFSVYTTSRATQEADVIMILT PDTVQPAVYKECIEPNLTPGKAIAFAHGFNIHFGQIVPPKDIDVFMVAPKGPGHLVRWMYEEGKGVPALISIHQDATGSC RDIALAYAKGIGATRAGVIETTFREETETDLFGEQAVLCGGATALIKAGFETLVEAGYQPEMAYFECLHELKLIVDLIYQ HGIAGMRYSISDTAKYGDVTRGDRVYEAVKPLMKQMLKEIQDGEFAREWILENQANRPVYNALLNKDKEHLVEKVGKELR QMMPWLSGKELK
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=328, Percent_Identity=36.280487804878, Blast_Score=155, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6323387, Length=319, Percent_Identity=33.5423197492163, Blast_Score=158, Evalue=1e-39,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_HYDS0 (B4U6I9)
Other databases:
- EMBL: CP001130 - RefSeq: YP_002120735.1 - ProteinModelPortal: B4U6I9 - SMR: B4U6I9 - GeneID: 6742848 - GenomeReviews: CP001130_GR - KEGG: hya:HY04AAS1_0065 - HOGENOM: HBG286525 - OMA: MAYAKGI - ProtClustDB: PRK05479 - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 36838; Mature: 36707
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: ACT_SITE 108-108
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIYYDEDASLGILAMKTVAIVGYGSQGHAHALNLRDSGIRVIVALDDKSPHRKTAMED CCEEEECCCCCCCHHEEEEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHC GFSVYTTSRATQEADVIMILTPDTVQPAVYKECIEPNLTPGKAIAFAHGFNIHFGQIVPP CCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCC KDIDVFMVAPKGPGHLVRWMYEEGKGVPALISIHQDATGSCRDIALAYAKGIGATRAGVI CCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHH ETTFREETETDLFGEQAVLCGGATALIKAGFETLVEAGYQPEMAYFECLHELKLIVDLIY HHHHHCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QHGIAGMRYSISDTAKYGDVTRGDRVYEAVKPLMKQMLKEIQDGEFAREWILENQANRPV HCCCCCEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH YNALLNKDKEHLVEKVGKELRQMMPWLSGKELK HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AKIYYDEDASLGILAMKTVAIVGYGSQGHAHALNLRDSGIRVIVALDDKSPHRKTAMED CEEEECCCCCCCHHEEEEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHC GFSVYTTSRATQEADVIMILTPDTVQPAVYKECIEPNLTPGKAIAFAHGFNIHFGQIVPP CCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCC KDIDVFMVAPKGPGHLVRWMYEEGKGVPALISIHQDATGSCRDIALAYAKGIGATRAGVI CCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCHH ETTFREETETDLFGEQAVLCGGATALIKAGFETLVEAGYQPEMAYFECLHELKLIVDLIY HHHHHCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QHGIAGMRYSISDTAKYGDVTRGDRVYEAVKPLMKQMLKEIQDGEFAREWILENQANRPV HCCCCCEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHH YNALLNKDKEHLVEKVGKELRQMMPWLSGKELK HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA