Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952436

Identifier: 195952436

GI number: 195952436

Start: 51854

End: 53233

Strand: Direct

Name: 195952436

Synonym: HY04AAS1_0056

Alternate gene names: NA

Gene position: 51854-53233 (Clockwise)

Preceding gene: 195952435

Following gene: 195952438

Centisome position: 3.33

GC content: 33.84

Gene sequence:

>1380_bases
ATGAAAAAGGTTATTTTTGCTTTGGCTTTTTGTTTTATGGCATCTAACTCTTACGGTGTTTTATTAAAAGCTTCAAACGA
TAAATTTGCAGACGTAGGTTTAAAGCTTTCTATATGGGCTCAAGACAATGGCAAAGTAACCACTAACGATCACAAAAGCG
TAAACTTTTCGGTAGAAAACGCAAGGCTTTATTTTGTAGGGCAGATTAACCCAGTGGTGCAATTTGGTGCAAATATTGAT
TTTTCTGATAACAACGTTTTAATACCAGATGGTTCTGCTCGCTCTCACGATAAAATGCAGTATACTATCGTAAAAGACGC
CTTTATTAATTTTAAATTTAAAAAATCTTTTCAGATTACCGCTGGTCTTTTTTTGGACCCTTGGTCAAGAATCCCTTTAG
AAGATTTGTACTCTTTTATAGTGCCAATAGAAGATTACAACCCAGGTTTATCTGAAATAAATATAGATGGTGCTAGGCTT
TTACAAACAAACTATGCTGTAAACCCAAATTACCTTAACTATGATGGTGTTTATAAATTTAAACCCTTTATAAAACCCCT
TGTGTCTTTGACATTTGGTTCTGATGTAGGAAACGCCTTTAGGGATACAGGTATTGCTATTTGGGGTGATATAGCAAAAC
ATACGGCGCTAAAGTACTATATTATGGTAGGCAACGGAAGATATGACTATCAATATGGTAACAACGCCAAAAGCAACCTA
AAATACGGTTTTAGAATAGAACTTACACTTACGTTTTTAGGCTATAAAGGAGAACCAGATTACGTAGATAAAGACATGTT
TTTTGGAAAAAGGAAAACCCTTACATTTTCTTTTGCTTATCAACAGCAAAGAGTAGACTGCTCTAACCCTTGGCTAAACA
GTGTAAATCAAACAAATATATGTAATGGTCAGACATCTTCCACCACAGCAAAAGCCTATACGTTTGATGTGCTTTGGGAA
CAAAAGTTTGGTGATTTTGTACCAAATGTCCAAGGAGCATGGCTTCTTCAAAAAGATTTAGGCTTTTCAAAAGCTAATAG
CAATATATCACAACCAGAAGCGGAAGGCTATTATCTTCAAACACAGCTTTTATACGATAGATATATTGGCATCGGTAAAC
CAGCGCTTGTATTAAGATATGAAGAAGACAAGAATAAAAACTATTATGTAGATCCAGTTAATCAAAATTCTTTTATAACC
ACAAAGGTATTTTTAACGGATGTATTTGTAAATTATTACATAGACAACGAAAATGCAAACATGTCTTTTGGTGTTCAGTT
TATAAATCCTGATGCAAATCTTATAAACGCAACTTCAAATGGCAAAGATAATATAAGGGCTTTTAATGATTGGACTTTGG
CTTTTAGGATAGTGTTTTAA

Upstream 100 bases:

>100_bases
GGCAGCTATAGAAGAGCTTTCAGCTACAGCAAAGTCATTGGCTGATGTAGCTCAAGAGCTTAAAATAGAAGTTACTAAAT
TTAAGTTTTAGGATTTTGGT

Downstream 100 bases:

>100_bases
CGTTACAATCTTTTTAAGTCTATCGTAGCTTTTCTTGTGACTATTCTTATCAACTTTGGAAAATCGTTTTGATGTGTTGA
GCTATCGTACCATATAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MKKVIFALAFCFMASNSYGVLLKASNDKFADVGLKLSIWAQDNGKVTTNDHKSVNFSVENARLYFVGQINPVVQFGANID
FSDNNVLIPDGSARSHDKMQYTIVKDAFINFKFKKSFQITAGLFLDPWSRIPLEDLYSFIVPIEDYNPGLSEINIDGARL
LQTNYAVNPNYLNYDGVYKFKPFIKPLVSLTFGSDVGNAFRDTGIAIWGDIAKHTALKYYIMVGNGRYDYQYGNNAKSNL
KYGFRIELTLTFLGYKGEPDYVDKDMFFGKRKTLTFSFAYQQQRVDCSNPWLNSVNQTNICNGQTSSTTAKAYTFDVLWE
QKFGDFVPNVQGAWLLQKDLGFSKANSNISQPEAEGYYLQTQLLYDRYIGIGKPALVLRYEEDKNKNYYVDPVNQNSFIT
TKVFLTDVFVNYYIDNENANMSFGVQFINPDANLINATSNGKDNIRAFNDWTLAFRIVF

Sequences:

>Translated_459_residues
MKKVIFALAFCFMASNSYGVLLKASNDKFADVGLKLSIWAQDNGKVTTNDHKSVNFSVENARLYFVGQINPVVQFGANID
FSDNNVLIPDGSARSHDKMQYTIVKDAFINFKFKKSFQITAGLFLDPWSRIPLEDLYSFIVPIEDYNPGLSEINIDGARL
LQTNYAVNPNYLNYDGVYKFKPFIKPLVSLTFGSDVGNAFRDTGIAIWGDIAKHTALKYYIMVGNGRYDYQYGNNAKSNL
KYGFRIELTLTFLGYKGEPDYVDKDMFFGKRKTLTFSFAYQQQRVDCSNPWLNSVNQTNICNGQTSSTTAKAYTFDVLWE
QKFGDFVPNVQGAWLLQKDLGFSKANSNISQPEAEGYYLQTQLLYDRYIGIGKPALVLRYEEDKNKNYYVDPVNQNSFIT
TKVFLTDVFVNYYIDNENANMSFGVQFINPDANLINATSNGKDNIRAFNDWTLAFRIVF
>Mature_459_residues
MKKVIFALAFCFMASNSYGVLLKASNDKFADVGLKLSIWAQDNGKVTTNDHKSVNFSVENARLYFVGQINPVVQFGANID
FSDNNVLIPDGSARSHDKMQYTIVKDAFINFKFKKSFQITAGLFLDPWSRIPLEDLYSFIVPIEDYNPGLSEINIDGARL
LQTNYAVNPNYLNYDGVYKFKPFIKPLVSLTFGSDVGNAFRDTGIAIWGDIAKHTALKYYIMVGNGRYDYQYGNNAKSNL
KYGFRIELTLTFLGYKGEPDYVDKDMFFGKRKTLTFSFAYQQQRVDCSNPWLNSVNQTNICNGQTSSTTAKAYTFDVLWE
QKFGDFVPNVQGAWLLQKDLGFSKANSNISQPEAEGYYLQTQLLYDRYIGIGKPALVLRYEEDKNKNYYVDPVNQNSFIT
TKVFLTDVFVNYYIDNENANMSFGVQFINPDANLINATSNGKDNIRAFNDWTLAFRIVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52262; Mature: 52262

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVIFALAFCFMASNSYGVLLKASNDKFADVGLKLSIWAQDNGKVTTNDHKSVNFSVEN
CHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCEEEEEEECCCCEEEECCCCEEEEEEEC
ARLYFVGQINPVVQFGANIDFSDNNVLIPDGSARSHDKMQYTIVKDAFINFKFKKSFQIT
EEEEEEECCCEEEEECCCCEECCCEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEE
AGLFLDPWSRIPLEDLYSFIVPIEDYNPGLSEINIDGARLLQTNYAVNPNYLNYDGVYKF
EEEEECCCCCCCHHHHHHHEEEEECCCCCCCEEECCCEEEEEECCEECCCEECCCCEEEE
KPFIKPLVSLTFGSDVGNAFRDTGIAIWGDIAKHTALKYYIMVGNGRYDYQYGNNAKSNL
CHHHHHHHEEECCCCCCCHHHHCCEEEEECHHHCCEEEEEEEECCCEEEEECCCCCCCCC
KYGFRIELTLTFLGYKGEPDYVDKDMFFGKRKTLTFSFAYQQQRVDCSNPWLNSVNQTNI
EEEEEEEEEEEEEEECCCCCCCCCHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCC
CNGQTSSTTAKAYTFDVLWEQKFGDFVPNVQGAWLLQKDLGFSKANSNISQPEAEGYYLQ
CCCCCCCCEEEEEEEEEEEEHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEE
TQLLYDRYIGIGKPALVLRYEEDKNKNYYVDPVNQNSFITTKVFLTDVFVNYYIDNENAN
EEEEEHHHCCCCCCEEEEEEECCCCCCEEECCCCCCCEEEEEEEEEEEEEEEEEECCCCC
MSFGVQFINPDANLINATSNGKDNIRAFNDWTLAFRIVF
EEEEEEEECCCCCEEEECCCCCCCEEEEECEEEEEEEEC
>Mature Secondary Structure
MKKVIFALAFCFMASNSYGVLLKASNDKFADVGLKLSIWAQDNGKVTTNDHKSVNFSVEN
CHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCEEEEEEECCCCEEEECCCCEEEEEEEC
ARLYFVGQINPVVQFGANIDFSDNNVLIPDGSARSHDKMQYTIVKDAFINFKFKKSFQIT
EEEEEEECCCEEEEECCCCEECCCEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEE
AGLFLDPWSRIPLEDLYSFIVPIEDYNPGLSEINIDGARLLQTNYAVNPNYLNYDGVYKF
EEEEECCCCCCCHHHHHHHEEEEECCCCCCCEEECCCEEEEEECCEECCCEECCCCEEEE
KPFIKPLVSLTFGSDVGNAFRDTGIAIWGDIAKHTALKYYIMVGNGRYDYQYGNNAKSNL
CHHHHHHHEEECCCCCCCHHHHCCEEEEECHHHCCEEEEEEEECCCEEEEECCCCCCCCC
KYGFRIELTLTFLGYKGEPDYVDKDMFFGKRKTLTFSFAYQQQRVDCSNPWLNSVNQTNI
EEEEEEEEEEEEEEECCCCCCCCCHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCC
CNGQTSSTTAKAYTFDVLWEQKFGDFVPNVQGAWLLQKDLGFSKANSNISQPEAEGYYLQ
CCCCCCCCEEEEEEEEEEEEHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEE
TQLLYDRYIGIGKPALVLRYEEDKNKNYYVDPVNQNSFITTKVFLTDVFVNYYIDNENAN
EEEEEHHHCCCCCCEEEEEEECCCCCCEEECCCCCCCEEEEEEEEEEEEEEEEEECCCCC
MSFGVQFINPDANLINATSNGKDNIRAFNDWTLAFRIVF
EEEEEEEECCCCCEEEECCCCCCCEEEEECEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA