Click here to switch to the map view.

The map label for this gene is ydcY [H]

Identifier: 194738390

GI number: 194738390

Start: 1650048

End: 1650281

Strand: Reverse

Name: ydcY [H]

Synonym: SeSA_A1710

Alternate gene names: 194738390

Gene position: 1650281-1650048 (Counterclockwise)

Preceding gene: 194735293

Following gene: 194737426

Centisome position: 35.04

GC content: 56.84

Gene sequence:

>234_bases
ATGTCGCACCTGGAGGAAGTGAGCGCCCGCGTGGATGCCGCTATCGCGGAGAGCGTAATTGCCCATATGAATGAATTGCT
GATTGCCTTGAGCGATGACGCTGAATTACGTCGCGAAGATCGTTATGTGCAGCAGCAGCGTTTGCGCACGGCTATCGCGC
ATCACGGCAGGCAATATCAAGAAGATCGGGACGCGCGCCGCGAACAGCTCACCAAAGGCGGCACGATCCTGTAA

Upstream 100 bases:

>100_bases
AAGTTAAATCAGGAGGGCGGCGGCGAATTACCGCATCGGGCGACAATAACGCGTATAATAGGCGAATCATGCTGTTACAG
AATAAAGAGTAGGAGAGCTT

Downstream 100 bases:

>100_bases
CCCATTAAAACTGGCGCTTCGCAATCAGCCATGCGCCAATGACCAGCAACAGCGCGCCGAACGCCGGCCCGACCATTGCG
CGTAACGTGACGCCGTGGCT

Product: putative cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MSHLEEVSARVDAAIAESVIAHMNELLIALSDDAELRREDRYVQQQRLRTAIAHHGRQYQEDRDARREQLTKGGTIL

Sequences:

>Translated_77_residues
MSHLEEVSARVDAAIAESVIAHMNELLIALSDDAELRREDRYVQQQRLRTAIAHHGRQYQEDRDARREQLTKGGTIL
>Mature_76_residues
SHLEEVSARVDAAIAESVIAHMNELLIALSDDAELRREDRYVQQQRLRTAIAHHGRQYQEDRDARREQLTKGGTIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787717, Length=77, Percent_Identity=85.7142857142857, Blast_Score=130, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019671 [H]

Pfam domain/function: PF10735 DUF2526 [H]

EC number: NA

Molecular weight: Translated: 8853; Mature: 8722

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLEEVSARVDAAIAESVIAHMNELLIALSDDAELRREDRYVQQQRLRTAIAHHGRQYQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
EDRDARREQLTKGGTIL
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SHLEEVSARVDAAIAESVIAHMNELLIALSDDAELRREDRYVQQQRLRTAIAHHGRQYQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
EDRDARREQLTKGGTIL
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]