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The map label for this gene is ydcX [H]

Identifier: 194735293

GI number: 194735293

Start: 1657002

End: 1657175

Strand: Reverse

Name: ydcX [H]

Synonym: SeSA_A1714

Alternate gene names: 194735293

Gene position: 1657175-1657002 (Counterclockwise)

Preceding gene: 194735825

Following gene: 194738390

Centisome position: 35.19

GC content: 44.25

Gene sequence:

>174_bases
ATGACCCTCTTTCAAAAGATATTAATTTTTTACGCCGTCATGGCGGTGATATCATTCCTGATCACCTGGTTTTTGACTCA
TGACAAAAAACGAATTCGTTTCCTGAGCGCCTTTTTGGTTGGCGCGACATGGCCGATAAGTTTCCCCGTCGCGTTGCTGT
TTTCGCTTTTCTGA

Upstream 100 bases:

>100_bases
TGAGAACGTTTTGCTGTTAAGGCTGACAAACCTTGATGTGTGTCAAATAAAAAGAGCATATTGCGCGCGTTTTTTCCTCT
GGTTGGCGCGGATGCCTGAT

Downstream 100 bases:

>100_bases
CCTCAAGCCCGATACAGGTTACCGGGCATGGTTTTTCCGCCAGGTCAGGCTATCAGGGCAATTAATTGCTCTCTGTCTAC
GTCGGTAACGTCCTGCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MTLFQKILIFYAVMAVISFLITWFLTHDKKRIRFLSAFLVGATWPISFPVALLFSLF

Sequences:

>Translated_57_residues
MTLFQKILIFYAVMAVISFLITWFLTHDKKRIRFLSAFLVGATWPISFPVALLFSLF
>Mature_56_residues
TLFQKILIFYAVMAVISFLITWFLTHDKKRIRFLSAFLVGATWPISFPVALLFSLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjdO [H]

Homologues:

Organism=Escherichia coli, GI87081912, Length=57, Percent_Identity=84.2105263157895, Blast_Score=101, Evalue=1e-23,
Organism=Escherichia coli, GI87082373, Length=57, Percent_Identity=68.4210526315789, Blast_Score=80, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019689 [H]

Pfam domain/function: PF10753 DUF2566 [H]

EC number: NA

Molecular weight: Translated: 6671; Mature: 6540

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFQKILIFYAVMAVISFLITWFLTHDKKRIRFLSAFLVGATWPISFPVALLFSLF
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
>Mature Secondary Structure 
TLFQKILIFYAVMAVISFLITWFLTHDKKRIRFLSAFLVGATWPISFPVALLFSLF
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]