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The map label for this gene is yrdR [H]

Identifier: 194735050

GI number: 194735050

Start: 2070671

End: 2071633

Strand: Reverse

Name: yrdR [H]

Synonym: SeSA_A2180

Alternate gene names: 194735050

Gene position: 2071633-2070671 (Counterclockwise)

Preceding gene: 194735721

Following gene: 194737977

Centisome position: 43.99

GC content: 45.59

Gene sequence:

>963_bases
ATGAATTCATATCTGAAAGGGTTACTCTGTTGCTTATTAGCTACAGTGTCATGGGGGGGGATGTTCCCGGTAATGACACA
TGCTCTAACTTATATTGATCCGTTTAATTTTACTACTTTTCGCTATGGGATTGCGGGTATTGCCTTTGCATTGTTATTGC
TATTTCGTGAAGGCCAAAATTCATTCCGGTTAAAAGGAGAGCGCTGGGGGTTGGCTTGGTTGTTTGGTACGCTGGGTTTT
GCTGGTTTTGGTTTTCTGGTCTTTCTGGGCCAGTCGCTTGCGGGGCCCGGGGGGGCACTTACTGCATCCATTATGATGGC
TACTATGCCGATGTTAGGGCTTCTGACTATCTGGGCTCTGAAGAAAGTACGCCCTCACGCCAGTACTATGTCTTTTATCC
TGCTGTCTTTTAGTGGTGTCGTCCTGGTTATTACCAATGGTGATGTCTTTGCCGTCCTTAATTCACCTATTAGCCTTGCT
GCAAATCTGCTACTTATCGCTGGAGCATTGTGTTGGGTACTGTATACCATTGGTGGAAGCTATTTTCCGGGCTGGAGCCC
GTTACGTTATACAACTATGACCACGCTGTTGGGGATGATTAGTGTTGTATTAATTGATTTGTTTCTGGTTGGATCGGGTG
CAATTTCTGTACCGAGTGCAGCGTCGATAATAACTATTGTTCCTCATCTATTTTATATGGCTCTGGTGGCTGGTCTGGTG
GCCGTGCTGTGCTGGAATGTTGGTAATCGCATAATTACTCCAACAAATGGTGTGCTCTTTATGGATGTTGTTCCCATTAC
CGCTTTTATTGTTTCAGCTCTAAATGGCGTTGTGCCAACAAACATGCAAATTATCGGGGCCGTAATCACAGCTATGGCTC
TTGTACTCAACAACCTGAACCAACGTAAACTCGCGATGTTGGCAACCCAGGCTAATACCCTGAAGGCATCGACTAGTCAC
TAA

Upstream 100 bases:

>100_bases
ATATAGATATCAATATTAACGAATGGCTATTTTTGAAGTGTTGTGAAAATGTAAGATACAACATCCATGATAACTATCTT
TTTAATGTAAGGTGAAAAAT

Downstream 100 bases:

>100_bases
TAGAGATATTGCACCTTTTTTTGAAGAGCTGGTGCAATTATAAGTCTACAGATGACATTTTATTTACTGATAAGTAATGG
ATGAATTATGGCTATTAAAG

Product: transporter EamA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNSYLKGLLCCLLATVSWGGMFPVMTHALTYIDPFNFTTFRYGIAGIAFALLLLFREGQNSFRLKGERWGLAWLFGTLGF
AGFGFLVFLGQSLAGPGGALTASIMMATMPMLGLLTIWALKKVRPHASTMSFILLSFSGVVLVITNGDVFAVLNSPISLA
ANLLLIAGALCWVLYTIGGSYFPGWSPLRYTTMTTLLGMISVVLIDLFLVGSGAISVPSAASIITIVPHLFYMALVAGLV
AVLCWNVGNRIITPTNGVLFMDVVPITAFIVSALNGVVPTNMQIIGAVITAMALVLNNLNQRKLAMLATQANTLKASTSH

Sequences:

>Translated_320_residues
MNSYLKGLLCCLLATVSWGGMFPVMTHALTYIDPFNFTTFRYGIAGIAFALLLLFREGQNSFRLKGERWGLAWLFGTLGF
AGFGFLVFLGQSLAGPGGALTASIMMATMPMLGLLTIWALKKVRPHASTMSFILLSFSGVVLVITNGDVFAVLNSPISLA
ANLLLIAGALCWVLYTIGGSYFPGWSPLRYTTMTTLLGMISVVLIDLFLVGSGAISVPSAASIITIVPHLFYMALVAGLV
AVLCWNVGNRIITPTNGVLFMDVVPITAFIVSALNGVVPTNMQIIGAVITAMALVLNNLNQRKLAMLATQANTLKASTSH
>Mature_320_residues
MNSYLKGLLCCLLATVSWGGMFPVMTHALTYIDPFNFTTFRYGIAGIAFALLLLFREGQNSFRLKGERWGLAWLFGTLGF
AGFGFLVFLGQSLAGPGGALTASIMMATMPMLGLLTIWALKKVRPHASTMSFILLSFSGVVLVITNGDVFAVLNSPISLA
ANLLLIAGALCWVLYTIGGSYFPGWSPLRYTTMTTLLGMISVVLIDLFLVGSGAISVPSAASIITIVPHLFYMALVAGLV
AVLCWNVGNRIITPTNGVLFMDVVPITAFIVSALNGVVPTNMQIIGAVITAMALVLNNLNQRKLAMLATQANTLKASTSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34096; Mature: 34096

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYLKGLLCCLLATVSWGGMFPVMTHALTYIDPFNFTTFRYGIAGIAFALLLLFREGQN
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SFRLKGERWGLAWLFGTLGFAGFGFLVFLGQSLAGPGGALTASIMMATMPMLGLLTIWAL
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KKVRPHASTMSFILLSFSGVVLVITNGDVFAVLNSPISLAANLLLIAGALCWVLYTIGGS
HHHCCCHHHHHHHHHHHCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
YFPGWSPLRYTTMTTLLGMISVVLIDLFLVGSGAISVPSAASIITIVPHLFYMALVAGLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AVLCWNVGNRIITPTNGVLFMDVVPITAFIVSALNGVVPTNMQIIGAVITAMALVLNNLN
HHHHHHCCCEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
QRKLAMLATQANTLKASTSH
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNSYLKGLLCCLLATVSWGGMFPVMTHALTYIDPFNFTTFRYGIAGIAFALLLLFREGQN
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
SFRLKGERWGLAWLFGTLGFAGFGFLVFLGQSLAGPGGALTASIMMATMPMLGLLTIWAL
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KKVRPHASTMSFILLSFSGVVLVITNGDVFAVLNSPISLAANLLLIAGALCWVLYTIGGS
HHHCCCHHHHHHHHHHHCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
YFPGWSPLRYTTMTTLLGMISVVLIDLFLVGSGAISVPSAASIITIVPHLFYMALVAGLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AVLCWNVGNRIITPTNGVLFMDVVPITAFIVSALNGVVPTNMQIIGAVITAMALVLNNLN
HHHHHHCCCEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
QRKLAMLATQANTLKASTSH
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]