| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is tus [H]
Identifier: 194734192
GI number: 194734192
Start: 1512852
End: 1513781
Strand: Reverse
Name: tus [H]
Synonym: SeSA_A1569
Alternate gene names: 194734192
Gene position: 1513781-1512852 (Counterclockwise)
Preceding gene: 194738016
Following gene: 194735502
Centisome position: 32.15
GC content: 53.44
Gene sequence:
>930_bases ATGTCCCGCTACGATCTCGTTGAACGCCTGAATGGCACTTTCCGCCAGATAGAACAACACCTGGCGGCGCTGACGGATAA TCTACAGCAGCATTCGCTACTTATCGCCCGTGTCTTTTCACTGCCGCAGGTGACCAAAGAGGCGGAACATGCGCCGCTGG ACACTATCGAGGTCACGCAACATCTGGGGAAAGAGGCCGAAACGCTGGCGCTACGTCACTATCGCCATTTGTTTATTCAA CAGCAGTCCGAAAACCGCAGCAGTAAAGCCGCCGTCCGCCTGCCTGGCGTCTTATGCTATCAAGTGGATAATGCGACACA GTTAGATCTGGAAAATCAGGTACAGCGCATTAACCAGTTGAAAACCACCTTCGAGCAGATGGTTACGGTAGAGTCCGGTC TTCCCTCAGCGGCACGTTTTGAGTGGGTGCATCGGCATCTACCCGGCTTAATTACGCTGAACGCTTACCGCACGCTGACG CTTATCAATAACCCCGCCACTATACGTTTCGGCTGGGCAAATAAACATATTATTAAAAATTTAAGCCGGGATGAGGTTCT GAGCCAGTTGAAAAAAAGCCTCGCGTCGCCGCGCAGCGTCCCGCCGTGGACGCGCGAACAATGGCAATTCAAGCTGGAAC GGGAATATCAGGATATCGCTGCCTTACCGCAGCAGGCCCGACTCAAGATTAAGCGTCCGGTTAAAGTACAGCCGATCGCC CGCATCTGGTATAAAGGCCAGCAGAAACAGGTGCAACACGCCTGCCCCACGCCGATTATCGCATTAATCAACACGGACAA CGGCGCTGGCGTGCCGGATATTGGCGGGCTGGAAAACTATGACGCCGATAATATTCAGCACCGTTTTAAACCACAGGCGC AGCCGCTGCGACTGATTATTCCGCGACTGCACCTGTATGTGGCGGATTAA
Upstream 100 bases:
>100_bases GATGCCCGACATGACCGCTGCCTGACGTATTTTGCACGTTGGTTGAGCGGCGGGAACTGTGCTATACAGATAGTATGTTG TAACTAAAGTGAGTAATACC
Downstream 100 bases:
>100_bases CGTCCCGGCGTCATACTGCCAACCATCAATTCCGGACGTACCCAGGCGTCGAACTCCTCATCGCTAAGATATCCTAATGC CACGGCTGAGGCTTTGAGCG
Product: DNA replication terminus site-binding protein
Products: NA
Alternate protein names: Ter-binding protein [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSRYDLVERLNGTFRQIEQHLAALTDNLQQHSLLIARVFSLPQVTKEAEHAPLDTIEVTQHLGKEAETLALRHYRHLFIQ QQSENRSSKAAVRLPGVLCYQVDNATQLDLENQVQRINQLKTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLT LINNPATIRFGWANKHIIKNLSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQARLKIKRPVKVQPIA RIWYKGQQKQVQHACPTPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLIIPRLHLYVAD
Sequences:
>Translated_309_residues MSRYDLVERLNGTFRQIEQHLAALTDNLQQHSLLIARVFSLPQVTKEAEHAPLDTIEVTQHLGKEAETLALRHYRHLFIQ QQSENRSSKAAVRLPGVLCYQVDNATQLDLENQVQRINQLKTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLT LINNPATIRFGWANKHIIKNLSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQARLKIKRPVKVQPIA RIWYKGQQKQVQHACPTPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLIIPRLHLYVAD >Mature_308_residues SRYDLVERLNGTFRQIEQHLAALTDNLQQHSLLIARVFSLPQVTKEAEHAPLDTIEVTQHLGKEAETLALRHYRHLFIQQ QSENRSSKAAVRLPGVLCYQVDNATQLDLENQVQRINQLKTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLTL INNPATIRFGWANKHIIKNLSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQARLKIKRPVKVQPIAR IWYKGQQKQVQHACPTPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLIIPRLHLYVAD
Specific function: Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tus family [H]
Homologues:
Organism=Escherichia coli, GI1787895, Length=309, Percent_Identity=79.9352750809062, Blast_Score=523, Evalue=1e-150,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008865 [H]
Pfam domain/function: PF05472 Ter [H]
EC number: NA
Molecular weight: Translated: 35487; Mature: 35356
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYDLVERLNGTFRQIEQHLAALTDNLQQHSLLIARVFSLPQVTKEAEHAPLDTIEVTQ CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHH HLGKEAETLALRHYRHLFIQQQSENRSSKAAVRLPGVLCYQVDNATQLDLENQVQRINQL HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHH KTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLTLINNPATIRFGWANKHIIKN HHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECEEEEEEECCCCEEEECCCCHHHHHC LSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQARLKIKRPVKVQPIA CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCEEECCCCCCCHHH RIWYKGQQKQVQHACPTPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLII HHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHE PRLHLYVAD EEHEEEECC >Mature Secondary Structure SRYDLVERLNGTFRQIEQHLAALTDNLQQHSLLIARVFSLPQVTKEAEHAPLDTIEVTQ CHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHH HLGKEAETLALRHYRHLFIQQQSENRSSKAAVRLPGVLCYQVDNATQLDLENQVQRINQL HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHH KTTFEQMVTVESGLPSAARFEWVHRHLPGLITLNAYRTLTLINNPATIRFGWANKHIIKN HHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECEEEEEEECCCCEEEECCCCHHHHHC LSRDEVLSQLKKSLASPRSVPPWTREQWQFKLEREYQDIAALPQQARLKIKRPVKVQPIA CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCEEECCCCCCCHHH RIWYKGQQKQVQHACPTPIIALINTDNGAGVPDIGGLENYDADNIQHRFKPQAQPLRLII HHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHE PRLHLYVAD EEHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA