| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is metE [H]
Identifier: 194334085
GI number: 194334085
Start: 1377356
End: 1379815
Strand: Reverse
Name: metE [H]
Synonym: Paes_1272
Alternate gene names: 194334085
Gene position: 1379815-1377356 (Counterclockwise)
Preceding gene: 194334086
Following gene: 194334084
Centisome position: 54.91
GC content: 54.07
Gene sequence:
>2460_bases ATGCTTTCGCGGACAAAAGCATCGATGAAAAAGCACGCCTGCCGGACGACGTCCCACGGCCTGGCGGAAGCTATTCTATT GTCTTTTCCCACGCAAGCATACAGACAGGCTGGAAACCACTCCAGAATACGTATGCTGACTCACACTCTCGGATACCCGA GGCTCGGTGCCTTCAGAGAAATCAAAAAAGCCTGTGAAGGTTACTGGAAGGGGGCCCTCGACGAAAAAGCCCTCAGATCT GCATCCCTCGAAGAAAAACACCGACGCTGGCGCGCCCAGCAGGAAGCGGGCATGGATCTGGTTGCCTGCAATGATTTTTC CCTGTATGATCATGTGCAGGATATGAGCTTCATGCTTGGTGTCATTCCTGAACGTTATAAGCCGCTTTGTCAGAACGTGT CGGACCTTGACCTGTATTTTGCCATGTGCAGGGGGTACCAGGAGGCCGGTTACGATGTGACGGCAATGGAAATGACCAAG TGGTTCGATACCAATTATCATTATATCGTTCCGGAGTTTACCCGGAATCAGGATTTCCATTACTATTCACGAAAATGCGT TGAGGATTTTCTTGAAGCAACGTCATTTTGTGTAAAAAAACCGAAAGTGGTGCTTGTCGGGCCGATAAGCTATCTGTTGC TCGGAAAGGAGAAAACCGACGATTTTCATCGTCTCGATCTCATCAATACCCTTCTGCCGGTCTACATGGCTGTACTCGAA GATCTCCACCATGCCGGGTGCACGTGGGTGCAGTTCGATGAGCCTTTTCTGGTGACGGATCTCGATGATCGAACCAGGAA GCTCTACGCAGAGGTGTATGGCGTCCTTCGGCAGCATTTCCCCGATGTTCATTTTCTGCTCGCGGCGTATTTCGACGGTT TTGGCGATAATCTTCAGACTGCCATGTCACTGCCGGTCGATACGCTGCACCTGGATGTCGTCAACGGCTTGTATGATCTG CCGTCTGTTTTCCGTGACGTTCCTCCTGACATGAATATTTCGCTTGGCGTTGTCGATGGCAGGAATATCTGGATCAACGA TGTCAATGAGTCGCTGGGCATACTGGGGCTGGCTGTCAGGGAGCTCGGGCACGACAGGGTGATGGTTTCGTCGTCCTGTT CTCTTCTGCACGTCCCCTATGACGTCCGGAACGAGCCTGATGGTGGTACGCTTCCGGATTTTCTGGGGCCCTGGCTGGCG TTTGCACGCCAGAAACTTGACGAGATCCGCCTGCTTGCCGATCTCATGGAGGATGAGGTGTCAGCTGATGCATTTTACGG ACTTGCAGAACACCTGAAACAGCTCGAGAAACGAAAATACTCGAAATTTCTCCGAAACAGTGAAGTCCGTGCCGCCCTGG ATGCATTGGCCGGTGAGCCGGTCGGGCGCAGGCAATCCATTGCCGAAAGAAGAGTGCTGCAGCAGGAATGGCTGCAGCTG CCGGTGCTTCCCACTACCATGATCGGTTCTCTTCCGCAGACTGCCGAGCTGCGTTCTCTGCGAAAACGCTACCGTGACGG GAGTCTCTCTGCGGAGGATTACGGGGCGGGTGTACGGGTATTGATTACCAATGCGATTCGATGGCAGGAATCCATCGGTC TCGATGTTCTCGTGCACGGGGAGTTCGAACGAACGGACATGGTGGAGTTTTTCGGTGAACATCTTGACGGTGTTGCGTTT ACCGGTAACGGGTGGGTGCAGAGCTATGGTACCCGAGCTGTCAAACCGCCGATTATTTATGCTGATGTCAGCAGAAAAAA GCCCATGACCGTGGAGCTTGCACGGTTCGCCCAGGGGCTGAGCGAGCGGCCGGTCAAGGGAATGCTGACGGGCCCGGGAA CCATTCTGAAGTGGTCGTTTGTCAGGAACGACCAGCCGCTCAGCGACACGGCAATGCAGGTTGCCCTGGCGTTGCGGGAA GAGGTGATGGACCTCGAACTTGCAGGTATCGAGATCATCCAGATCGATGAACCGGGGATTCGTGAAGGACTGCCTTTGAA GAAAGCTGATCGTGAAAGCTACCTGGAGTGGGCGGTTCGTGCTTTCCTTGTCTGTTCAGGCGGAGTAGGACCGGCGACCC AGATTCATACCCATATGTGCTATGCCGATTATGCCGATATTCTCGATGCTCTGATCAGGATGGACGCTGACGTCCTGACG ATCGAGACAGCCCGTTCCGATATGGAGGTGCTTTCCGAGTTCGCGGCTGCCGGGTATCCCGGTCAGCTGGGACCGGGCAT TTACGATATCCATTCACCACGCATCCCCTCCGTCAGGGAATTGAACACTCAGCTCGAAAAGGTGCTTTTGCATTTCGCTC CCCGGCAGATCTGGGTCAACCCCGATTGCGGTTTGAAAACAAGAGAGTGGGACGAAGTTGTGCCGGCTGTCGAGAACATG GTGACTGCAGCCCGAAAGGCCCGGCACCAGGTCAAGAAGAGGGCTCTTGAAGAGGGGTAG
Upstream 100 bases:
>100_bases TTGTGCAGCGTTATGCCACTGTTTCGCCTCTTGCGGAACGGGAAGGTGCTGCAGAACCGGCAAGCCAGGAGACCTGTCCT GCTTCTTTTTCTCTAACATT
Downstream 100 bases:
>100_bases TCCTCTGTTTTTTGTTTTCGATAAAAATTGTAGTACAATTAGGCTCAATTGTTCTTTCTCTTGTAACTGGTGCCGGTTTA AAAGCCGGAGAATAGGGAAG
Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
Products: NA
Alternate protein names: Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme [H]
Number of amino acids: Translated: 819; Mature: 819
Protein sequence:
>819_residues MLSRTKASMKKHACRTTSHGLAEAILLSFPTQAYRQAGNHSRIRMLTHTLGYPRLGAFREIKKACEGYWKGALDEKALRS ASLEEKHRRWRAQQEAGMDLVACNDFSLYDHVQDMSFMLGVIPERYKPLCQNVSDLDLYFAMCRGYQEAGYDVTAMEMTK WFDTNYHYIVPEFTRNQDFHYYSRKCVEDFLEATSFCVKKPKVVLVGPISYLLLGKEKTDDFHRLDLINTLLPVYMAVLE DLHHAGCTWVQFDEPFLVTDLDDRTRKLYAEVYGVLRQHFPDVHFLLAAYFDGFGDNLQTAMSLPVDTLHLDVVNGLYDL PSVFRDVPPDMNISLGVVDGRNIWINDVNESLGILGLAVRELGHDRVMVSSSCSLLHVPYDVRNEPDGGTLPDFLGPWLA FARQKLDEIRLLADLMEDEVSADAFYGLAEHLKQLEKRKYSKFLRNSEVRAALDALAGEPVGRRQSIAERRVLQQEWLQL PVLPTTMIGSLPQTAELRSLRKRYRDGSLSAEDYGAGVRVLITNAIRWQESIGLDVLVHGEFERTDMVEFFGEHLDGVAF TGNGWVQSYGTRAVKPPIIYADVSRKKPMTVELARFAQGLSERPVKGMLTGPGTILKWSFVRNDQPLSDTAMQVALALRE EVMDLELAGIEIIQIDEPGIREGLPLKKADRESYLEWAVRAFLVCSGGVGPATQIHTHMCYADYADILDALIRMDADVLT IETARSDMEVLSEFAAAGYPGQLGPGIYDIHSPRIPSVRELNTQLEKVLLHFAPRQIWVNPDCGLKTREWDEVVPAVENM VTAARKARHQVKKRALEEG
Sequences:
>Translated_819_residues MLSRTKASMKKHACRTTSHGLAEAILLSFPTQAYRQAGNHSRIRMLTHTLGYPRLGAFREIKKACEGYWKGALDEKALRS ASLEEKHRRWRAQQEAGMDLVACNDFSLYDHVQDMSFMLGVIPERYKPLCQNVSDLDLYFAMCRGYQEAGYDVTAMEMTK WFDTNYHYIVPEFTRNQDFHYYSRKCVEDFLEATSFCVKKPKVVLVGPISYLLLGKEKTDDFHRLDLINTLLPVYMAVLE DLHHAGCTWVQFDEPFLVTDLDDRTRKLYAEVYGVLRQHFPDVHFLLAAYFDGFGDNLQTAMSLPVDTLHLDVVNGLYDL PSVFRDVPPDMNISLGVVDGRNIWINDVNESLGILGLAVRELGHDRVMVSSSCSLLHVPYDVRNEPDGGTLPDFLGPWLA FARQKLDEIRLLADLMEDEVSADAFYGLAEHLKQLEKRKYSKFLRNSEVRAALDALAGEPVGRRQSIAERRVLQQEWLQL PVLPTTMIGSLPQTAELRSLRKRYRDGSLSAEDYGAGVRVLITNAIRWQESIGLDVLVHGEFERTDMVEFFGEHLDGVAF TGNGWVQSYGTRAVKPPIIYADVSRKKPMTVELARFAQGLSERPVKGMLTGPGTILKWSFVRNDQPLSDTAMQVALALRE EVMDLELAGIEIIQIDEPGIREGLPLKKADRESYLEWAVRAFLVCSGGVGPATQIHTHMCYADYADILDALIRMDADVLT IETARSDMEVLSEFAAAGYPGQLGPGIYDIHSPRIPSVRELNTQLEKVLLHFAPRQIWVNPDCGLKTREWDEVVPAVENM VTAARKARHQVKKRALEEG >Mature_819_residues MLSRTKASMKKHACRTTSHGLAEAILLSFPTQAYRQAGNHSRIRMLTHTLGYPRLGAFREIKKACEGYWKGALDEKALRS ASLEEKHRRWRAQQEAGMDLVACNDFSLYDHVQDMSFMLGVIPERYKPLCQNVSDLDLYFAMCRGYQEAGYDVTAMEMTK WFDTNYHYIVPEFTRNQDFHYYSRKCVEDFLEATSFCVKKPKVVLVGPISYLLLGKEKTDDFHRLDLINTLLPVYMAVLE DLHHAGCTWVQFDEPFLVTDLDDRTRKLYAEVYGVLRQHFPDVHFLLAAYFDGFGDNLQTAMSLPVDTLHLDVVNGLYDL PSVFRDVPPDMNISLGVVDGRNIWINDVNESLGILGLAVRELGHDRVMVSSSCSLLHVPYDVRNEPDGGTLPDFLGPWLA FARQKLDEIRLLADLMEDEVSADAFYGLAEHLKQLEKRKYSKFLRNSEVRAALDALAGEPVGRRQSIAERRVLQQEWLQL PVLPTTMIGSLPQTAELRSLRKRYRDGSLSAEDYGAGVRVLITNAIRWQESIGLDVLVHGEFERTDMVEFFGEHLDGVAF TGNGWVQSYGTRAVKPPIIYADVSRKKPMTVELARFAQGLSERPVKGMLTGPGTILKWSFVRNDQPLSDTAMQVALALRE EVMDLELAGIEIIQIDEPGIREGLPLKKADRESYLEWAVRAFLVCSGGVGPATQIHTHMCYADYADILDALIRMDADVLT IETARSDMEVLSEFAAAGYPGQLGPGIYDIHSPRIPSVRELNTQLEKVLLHFAPRQIWVNPDCGLKTREWDEVVPAVENM VTAARKARHQVKKRALEEG
Specific function: Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation [H]
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the vitamin-B12 independent methionine synthase family [H]
Homologues:
Organism=Escherichia coli, GI2367304, Length=766, Percent_Identity=46.2140992167102, Blast_Score=672, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320936, Length=773, Percent_Identity=43.5963777490297, Blast_Score=628, Evalue=1e-180,
Paralogues:
None
Copy number: 45,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013215 - InterPro: IPR006276 - InterPro: IPR002629 [H]
Pfam domain/function: PF08267 Meth_synt_1; PF01717 Meth_synt_2 [H]
EC number: =2.1.1.14 [H]
Molecular weight: Translated: 92655; Mature: 92655
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRTKASMKKHACRTTSHGLAEAILLSFPTQAYRQAGNHSRIRMLTHTLGYPRLGAFRE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCCHHHHH IKKACEGYWKGALDEKALRSASLEEKHRRWRAQQEAGMDLVACNDFSLYDHVQDMSFMLG HHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH VIPERYKPLCQNVSDLDLYFAMCRGYQEAGYDVTAMEMTKWFDTNYHYIVPEFTRNQDFH HCCHHHHHHHCCCHHHHHHHHHHHCHHHCCCCEEHHHHHHHHCCCCEEECCCCCCCCCCH YYSRKCVEDFLEATSFCVKKPKVVLVGPISYLLLGKEKTDDFHRLDLINTLLPVYMAVLE HHHHHHHHHHHHHHHHHHCCCCEEEECCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHH DLHHAGCTWVQFDEPFLVTDLDDRTRKLYAEVYGVLRQHFPDVHFLLAAYFDGFGDNLQT HHHHCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHH AMSLPVDTLHLDVVNGLYDLPSVFRDVPPDMNISLGVVDGRNIWINDVNESLGILGLAVR HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHH ELGHDRVMVSSSCSLLHVPYDVRNEPDGGTLPDFLGPWLAFARQKLDEIRLLADLMEDEV HCCCCEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SADAFYGLAEHLKQLEKRKYSKFLRNSEVRAALDALAGEPVGRRQSIAERRVLQQEWLQL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC PVLPTTMIGSLPQTAELRSLRKRYRDGSLSAEDYGAGVRVLITNAIRWQESIGLDVLVHG CCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHCCCEEEEEHHHHHHHHHCCCEEEEEC EFERTDMVEFFGEHLDGVAFTGNGWVQSYGTRAVKPPIIYADVSRKKPMTVELARFAQGL CCCHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCC SERPVKGMLTGPGTILKWSFVRNDQPLSDTAMQVALALREEVMDLELAGIEIIQIDEPGI CCCCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCC REGLPLKKADRESYLEWAVRAFLVCSGGVGPATQIHTHMCYADYADILDALIRMDADVLT CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE IETARSDMEVLSEFAAAGYPGQLGPGIYDIHSPRIPSVRELNTQLEKVLLHFAPRQIWVN EHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEC PDCGLKTREWDEVVPAVENMVTAARKARHQVKKRALEEG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSRTKASMKKHACRTTSHGLAEAILLSFPTQAYRQAGNHSRIRMLTHTLGYPRLGAFRE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCCHHHHH IKKACEGYWKGALDEKALRSASLEEKHRRWRAQQEAGMDLVACNDFSLYDHVQDMSFMLG HHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH VIPERYKPLCQNVSDLDLYFAMCRGYQEAGYDVTAMEMTKWFDTNYHYIVPEFTRNQDFH HCCHHHHHHHCCCHHHHHHHHHHHCHHHCCCCEEHHHHHHHHCCCCEEECCCCCCCCCCH YYSRKCVEDFLEATSFCVKKPKVVLVGPISYLLLGKEKTDDFHRLDLINTLLPVYMAVLE HHHHHHHHHHHHHHHHHHCCCCEEEECCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHH DLHHAGCTWVQFDEPFLVTDLDDRTRKLYAEVYGVLRQHFPDVHFLLAAYFDGFGDNLQT HHHHCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHH AMSLPVDTLHLDVVNGLYDLPSVFRDVPPDMNISLGVVDGRNIWINDVNESLGILGLAVR HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHH ELGHDRVMVSSSCSLLHVPYDVRNEPDGGTLPDFLGPWLAFARQKLDEIRLLADLMEDEV HCCCCEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SADAFYGLAEHLKQLEKRKYSKFLRNSEVRAALDALAGEPVGRRQSIAERRVLQQEWLQL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC PVLPTTMIGSLPQTAELRSLRKRYRDGSLSAEDYGAGVRVLITNAIRWQESIGLDVLVHG CCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHCCCEEEEEHHHHHHHHHCCCEEEEEC EFERTDMVEFFGEHLDGVAFTGNGWVQSYGTRAVKPPIIYADVSRKKPMTVELARFAQGL CCCHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCC SERPVKGMLTGPGTILKWSFVRNDQPLSDTAMQVALALREEVMDLELAGIEIIQIDEPGI CCCCCCCEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCC REGLPLKKADRESYLEWAVRAFLVCSGGVGPATQIHTHMCYADYADILDALIRMDADVLT CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE IETARSDMEVLSEFAAAGYPGQLGPGIYDIHSPRIPSVRELNTQLEKVLLHFAPRQIWVN EHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEC PDCGLKTREWDEVVPAVENMVTAARKARHQVKKRALEEG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA