| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213630
Identifier: 193213630
GI number: 193213630
Start: 2193846
End: 2195297
Strand: Direct
Name: 193213630
Synonym: Cpar_1994
Alternate gene names: NA
Gene position: 2193846-2195297 (Clockwise)
Preceding gene: 193213629
Following gene: 193213633
Centisome position: 95.83
GC content: 63.64
Gene sequence:
>1452_bases ATGACTGAACGCATCAGCGCCTTCTGGCTGAACCGGCTTCTCGGCATTCCAACCTCAACGCCGCTCAATCCCGCTTCGAT GAGCGCGCAGCTCCGCGTGGCCATCTGCCCGGCTCCGGGGCTGAGCCCGCGCCTGAGCGAGTTCACCGCAGCGCTGCGAG AGGCGTTCCGGCAATGCGGTGTGTCGATAGCCGACGAGGTTACGGAGAACGGTCGGCCGGCGCGCTTCGAGGCGGGCACG GCGGTGATCGCACCAGGGAGCTTTCCCGACAGGCTGCTGCCGATCAACCGGGTCTCGACGCTCTACAACAACCTCATCGT GGGCGTCTACGACGAACCGCCACCGGTGCGCGACGGCCAGACGCCGCAGGAGACGCTCGACGCAGTGATCGGGCGACTGG CGTGGGAGATGGTGCATTTGCTGATCTACGTCACCGACGAGAGCTGGACGGTGTGCAGCATGAACGGAGGCATCACCACC TTCGACACACCGCTGCCGGAGCCGGAAGACGTGCTGGAATCGCTGATTCCCAAAATCACCGCACAGGTGGTGCCGCCACG CGACGGCGACCTTGAGCTGCGCCACGAAGCGCTGGATACATCGACGCCGGAGTTTCGGAAGATTGCGGAGGATTTCGTGG AGTGCGGTCGGCGCTGGGCAGCCAACCCACGATTCATGAACCACACCTCGCGCGAATCGCTCGACTACCGGAACGACTTT TACCGCAAGATCGTCTCGCGCTATCTCGACGACCGCAGCGGCATGAGCTACGGCTTCTTCGCCCGCCAGCTCCCGGTTGC CGTCAAACCGGCGCGTGAGGCGAACGATACTGATGAAGTAAAGGAGAGCCTCGTGCCGGTCACGGTTGCAGGCAAACGCC TGCTGGTGCCCGTACCGGATGTGCGCATCTTGACGACCCGTTCGGGCTGCCGCAAAACGGCCATCGATCCGGAGCGCGAT CTGGTGGAAATCGGCCTTGATGCGGGCGGGAAACCGTGGCTCGCCACTCCGGCGGGACTGCCTGCGGACTTCGTCACCCG ACCATCGTTCGACACGCTCACCATCATCGCCCACGCCGTCGGCAACGCCGTGATCGCCAGCATTTTGCGCACGGTCCGCC CGGCAAGCCGCTTTCCCAAGCTGCTCGAACGCTTCGGCAGCGGCATGACCCACTGGCACCACTACCCCAACGACGACATG ATTCCGAAAGGGTATGTCAAACATGGAAGGGAAAATCCGCCTGTCTCCTGCTCGACGCCGCAATCGGCGGCCTACAGCCT CCTCGGGAAGCTCGACGCCCTGGAACTCGCGCTGGAAGCGGGCATCGACTATCTCGGAGACGTGCACATCGAGCCCGGCC ATGGCACCAACATCGTCGGCACGAGGTCACTGAGCGGTATGGCGATGTTCCTGAATTCAGAGCAATGCGCCTGTGCGCGA AAAGAGTGGTGA
Upstream 100 bases:
>100_bases CTGCGAAATCCTTCGCAAAAAGCTGCTCTGGAGCCACGAACACCCCACAGGCCAGTAACCGCACCGAGACCATTGACAAA CCCACGAGCCTCTGTTTTTC
Downstream 100 bases:
>100_bases AGGGGATTGGAATCGAAATCGATAGTTCGGTAGAGGAAGGTTTCAAATCAACCCAAACAGCAGATCGTCAACAGGTGAAG GGGACAACGACGGAAGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTERISAFWLNRLLGIPTSTPLNPASMSAQLRVAICPAPGLSPRLSEFTAALREAFRQCGVSIADEVTENGRPARFEAGT AVIAPGSFPDRLLPINRVSTLYNNLIVGVYDEPPPVRDGQTPQETLDAVIGRLAWEMVHLLIYVTDESWTVCSMNGGITT FDTPLPEPEDVLESLIPKITAQVVPPRDGDLELRHEALDTSTPEFRKIAEDFVECGRRWAANPRFMNHTSRESLDYRNDF YRKIVSRYLDDRSGMSYGFFARQLPVAVKPAREANDTDEVKESLVPVTVAGKRLLVPVPDVRILTTRSGCRKTAIDPERD LVEIGLDAGGKPWLATPAGLPADFVTRPSFDTLTIIAHAVGNAVIASILRTVRPASRFPKLLERFGSGMTHWHHYPNDDM IPKGYVKHGRENPPVSCSTPQSAAYSLLGKLDALELALEAGIDYLGDVHIEPGHGTNIVGTRSLSGMAMFLNSEQCACAR KEW
Sequences:
>Translated_483_residues MTERISAFWLNRLLGIPTSTPLNPASMSAQLRVAICPAPGLSPRLSEFTAALREAFRQCGVSIADEVTENGRPARFEAGT AVIAPGSFPDRLLPINRVSTLYNNLIVGVYDEPPPVRDGQTPQETLDAVIGRLAWEMVHLLIYVTDESWTVCSMNGGITT FDTPLPEPEDVLESLIPKITAQVVPPRDGDLELRHEALDTSTPEFRKIAEDFVECGRRWAANPRFMNHTSRESLDYRNDF YRKIVSRYLDDRSGMSYGFFARQLPVAVKPAREANDTDEVKESLVPVTVAGKRLLVPVPDVRILTTRSGCRKTAIDPERD LVEIGLDAGGKPWLATPAGLPADFVTRPSFDTLTIIAHAVGNAVIASILRTVRPASRFPKLLERFGSGMTHWHHYPNDDM IPKGYVKHGRENPPVSCSTPQSAAYSLLGKLDALELALEAGIDYLGDVHIEPGHGTNIVGTRSLSGMAMFLNSEQCACAR KEW >Mature_482_residues TERISAFWLNRLLGIPTSTPLNPASMSAQLRVAICPAPGLSPRLSEFTAALREAFRQCGVSIADEVTENGRPARFEAGTA VIAPGSFPDRLLPINRVSTLYNNLIVGVYDEPPPVRDGQTPQETLDAVIGRLAWEMVHLLIYVTDESWTVCSMNGGITTF DTPLPEPEDVLESLIPKITAQVVPPRDGDLELRHEALDTSTPEFRKIAEDFVECGRRWAANPRFMNHTSRESLDYRNDFY RKIVSRYLDDRSGMSYGFFARQLPVAVKPAREANDTDEVKESLVPVTVAGKRLLVPVPDVRILTTRSGCRKTAIDPERDL VEIGLDAGGKPWLATPAGLPADFVTRPSFDTLTIIAHAVGNAVIASILRTVRPASRFPKLLERFGSGMTHWHHYPNDDMI PKGYVKHGRENPPVSCSTPQSAAYSLLGKLDALELALEAGIDYLGDVHIEPGHGTNIVGTRSLSGMAMFLNSEQCACARK EW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53182; Mature: 53051
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERISAFWLNRLLGIPTSTPLNPASMSAQLRVAICPAPGLSPRLSEFTAALREAFRQCG CCCHHHHHHHHHHHCCCCCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC VSIADEVTENGRPARFEAGTAVIAPGSFPDRLLPINRVSTLYNNLIVGVYDEPPPVRDGQ CHHHHHHHCCCCCCEEECCEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCC TPQETLDAVIGRLAWEMVHLLIYVTDESWTVCSMNGGITTFDTPLPEPEDVLESLIPKIT CHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHH AQVVPPRDGDLELRHEALDTSTPEFRKIAEDFVECGRRWAANPRFMNHTSRESLDYRNDF HEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH YRKIVSRYLDDRSGMSYGFFARQLPVAVKPAREANDTDEVKESLVPVTVAGKRLLVPVPD HHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCCCCCHHHHHHHCCCEEECCCEEEEECCC VRILTTRSGCRKTAIDPERDLVEIGLDAGGKPWLATPAGLPADFVTRPSFDTLTIIAHAV EEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHH GNAVIASILRTVRPASRFPKLLERFGSGMTHWHHYPNDDMIPKGYVKHGRENPPVSCSTP HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC QSAAYSLLGKLDALELALEAGIDYLGDVHIEPGHGTNIVGTRSLSGMAMFLNSEQCACAR HHHHHHHHHHHHHHHHHHHHCCHHHCCEEECCCCCCCEEEECCCCCEEEEECCCHHHHHC KEW CCC >Mature Secondary Structure TERISAFWLNRLLGIPTSTPLNPASMSAQLRVAICPAPGLSPRLSEFTAALREAFRQCG CCHHHHHHHHHHHCCCCCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC VSIADEVTENGRPARFEAGTAVIAPGSFPDRLLPINRVSTLYNNLIVGVYDEPPPVRDGQ CHHHHHHHCCCCCCEEECCEEEECCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCC TPQETLDAVIGRLAWEMVHLLIYVTDESWTVCSMNGGITTFDTPLPEPEDVLESLIPKIT CHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHH AQVVPPRDGDLELRHEALDTSTPEFRKIAEDFVECGRRWAANPRFMNHTSRESLDYRNDF HEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH YRKIVSRYLDDRSGMSYGFFARQLPVAVKPAREANDTDEVKESLVPVTVAGKRLLVPVPD HHHHHHHHHHHCCCCCHHHHHHHCCCEECCCCCCCCHHHHHHHCCCEEECCCEEEEECCC VRILTTRSGCRKTAIDPERDLVEIGLDAGGKPWLATPAGLPADFVTRPSFDTLTIIAHAV EEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHH GNAVIASILRTVRPASRFPKLLERFGSGMTHWHHYPNDDMIPKGYVKHGRENPPVSCSTP HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC QSAAYSLLGKLDALELALEAGIDYLGDVHIEPGHGTNIVGTRSLSGMAMFLNSEQCACAR HHHHHHHHHHHHHHHHHHHHCCHHHCCEEECCCCCCCEEEECCCCCEEEEECCCHHHHHC KEW CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA