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The map label for this gene is yxiE [H]

Identifier: 193212518

GI number: 193212518

Start: 935288

End: 935722

Strand: Direct

Name: yxiE [H]

Synonym: Cpar_0856

Alternate gene names: 193212518

Gene position: 935288-935722 (Clockwise)

Preceding gene: 193212516

Following gene: 193212519

Centisome position: 40.86

GC content: 55.4

Gene sequence:

>435_bases
ATGATACAGCTTTCCAGAATTCTGTGCCCCACCGATTATTCCAACGCCTCCGCCAAAGCTGTGCGATATGCCGTGGAGCT
GGCAAAACGCGTCGATGCCCACGTCAGGTTTCTGCATATCCGTGAAAAAGATGGCTACGCGTCCGGCACCACTGCTGATG
AAGCCTCGATGCCCGAACGTTTTTCGCAGATGCTCATGTCGGAAATCAAAAACGGCTTGCAGGCCGATGTGAAGGAGGCC
GGTGGTGAGCCGAAAGAGGTGATCATCAGCCAGGCAGAGCAGTGGGGTGCCGATCTTATCGTGATGGGCTCGCATGGCAG
GAGTGGCCTCATGCGCCTGATGATGGGCAGCGTTGCCGAGGCGGTGTACCGTTCGGCTTCGATTCCGGTTCTGCTTATCA
AGCAGGATGCCATCGACAAAACTGCTACTGAATAA

Upstream 100 bases:

>100_bases
ATGCAGGTAAGTTCGGTGTTTCTCAAAAAAAATGTAAATTCAAGGTTTCATTGCCAGCCTTCATTGATCGCCCAACTATC
AGTAAACTAAAGCGTAATTG

Downstream 100 bases:

>100_bases
GCGATTTATCAGCGGGGTTTCTCTGGACGCGATCCGGGCGGCCTCAACTACTATTGTTCACTTTCAAGCTTCCCGATTAT
GAAACAGTTCAGGGATTCAA

Product: UspA domain-containing protein

Products: NA

Alternate protein names: USP YxiE [H]

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MIQLSRILCPTDYSNASAKAVRYAVELAKRVDAHVRFLHIREKDGYASGTTADEASMPERFSQMLMSEIKNGLQADVKEA
GGEPKEVIISQAEQWGADLIVMGSHGRSGLMRLMMGSVAEAVYRSASIPVLLIKQDAIDKTATE

Sequences:

>Translated_144_residues
MIQLSRILCPTDYSNASAKAVRYAVELAKRVDAHVRFLHIREKDGYASGTTADEASMPERFSQMLMSEIKNGLQADVKEA
GGEPKEVIISQAEQWGADLIVMGSHGRSGLMRLMMGSVAEAVYRSASIPVLLIKQDAIDKTATE
>Mature_144_residues
MIQLSRILCPTDYSNASAKAVRYAVELAKRVDAHVRFLHIREKDGYASGTTADEASMPERFSQMLMSEIKNGLQADVKEA
GGEPKEVIISQAEQWGADLIVMGSHGRSGLMRLMMGSVAEAVYRSASIPVLLIKQDAIDKTATE

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15728; Mature: 15728

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQLSRILCPTDYSNASAKAVRYAVELAKRVDAHVRFLHIREKDGYASGTTADEASMPER
CCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHCCHHH
FSQMLMSEIKNGLQADVKEAGGEPKEVIISQAEQWGADLIVMGSHGRSGLMRLMMGSVAE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
AVYRSASIPVLLIKQDAIDKTATE
HHHHCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MIQLSRILCPTDYSNASAKAVRYAVELAKRVDAHVRFLHIREKDGYASGTTADEASMPER
CCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHCCHHH
FSQMLMSEIKNGLQADVKEAGGEPKEVIISQAEQWGADLIVMGSHGRSGLMRLMMGSVAE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
AVYRSASIPVLLIKQDAIDKTATE
HHHHCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704263; 9384377 [H]