| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212516
Identifier: 193212516
GI number: 193212516
Start: 932626
End: 933501
Strand: Direct
Name: 193212516
Synonym: Cpar_0854
Alternate gene names: NA
Gene position: 932626-933501 (Clockwise)
Preceding gene: 193212515
Following gene: 193212518
Centisome position: 40.74
GC content: 54.91
Gene sequence:
>876_bases GTGAATACACTCAACGAACAGCAAACGCGGCTGATTCTCGGCTTTCAGAAAAACGAGATCACCGAGCACCATATCTACAA GAACCTCGCCAAGCGCATCGAAGGGGTGAAGAACCGCCGGATTTTTGCGCAGATTTCCGATGATGAGCTTCGCCACTACA ATATCTGGAAAAAGTACACCCAGCAGGATGTGGCGCCGAGCAAGTTCAAAATCTGGTTCTACTCGCTGATCAGCTTGCTG TTCGGCTTCACGTTTGCCGTCAAGCTGATGGAGGGTGGGGAAAAGGCTGCACAGCACGCCTATGAAAAAATGTCCGATCT TGGCGATGAGATCAGCAACGTCATCAAGGACGAGGAGGAGCACGAACAGGCGCTGCTTACGCTGCTCGATGAGGAGCGGC TCCAGTACACGGGCTCGATCGTGCTTGGCCTGAACGACGCCCTTGTGGAGCTGACCGGCGCGTTGGCAGGCCTGACCTTC GCCTTGCAGGATACCAGCCTGGTGGCCTTGACAGGGCTGATCACCGGTTTTGCAGCCGCGCTTTCGATGGCTTCGTCGGA GTACCTCTCCACGAAGGCCGAACCCGGCGCGAAGAATCCGGTCAAGGCCTCAATTTATACCGGCGTGGCCTACATTCTGG CCGTGGCCGTACTGATCATTCCCTATTTCGTGCTGTCGAATATTTACCTTAGCCTCGCCTTTGCATTTGCGGGTGCTTTG CTCATCGTGGCGCTGTTCAACTTCTACGTTTCGGTTGCCAAAGGGGTGCCGTTCAGGAGCCGTTTTCTTGAAATGGCCGG GCTGATCGTGGTGGTTTCGGGTATCAGCTTTTTGGCTGGCTTGGCTATGCGGTTCTTTTTCGGGATCGAGGTATAG
Upstream 100 bases:
>100_bases TACCAGAGCCTGATCGTTCCGCGTCTATTGTAAGTCCTTTGTCAGCCTGCTGCGACGTCCGCGGTAGGCTGATTTGTAAT TCACTAACGCCACGCTATCC
Downstream 100 bases:
>100_bases ATTGTTTTGTTCCCGTCAGCGTTCGAGTCTTTCAAGGATGGATTCGATGGCAAGATCGCCCTCTGTGTCGATATCGATGC AGAGGGCTTTTTCGTTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Ferritin CCC1 C Ferritin CCC1 Like C; Transmembrane Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNTLNEQQTRLILGFQKNEITEHHIYKNLAKRIEGVKNRRIFAQISDDELRHYNIWKKYTQQDVAPSKFKIWFYSLISLL FGFTFAVKLMEGGEKAAQHAYEKMSDLGDEISNVIKDEEEHEQALLTLLDEERLQYTGSIVLGLNDALVELTGALAGLTF ALQDTSLVALTGLITGFAAALSMASSEYLSTKAEPGAKNPVKASIYTGVAYILAVAVLIIPYFVLSNIYLSLAFAFAGAL LIVALFNFYVSVAKGVPFRSRFLEMAGLIVVVSGISFLAGLAMRFFFGIEV
Sequences:
>Translated_291_residues MNTLNEQQTRLILGFQKNEITEHHIYKNLAKRIEGVKNRRIFAQISDDELRHYNIWKKYTQQDVAPSKFKIWFYSLISLL FGFTFAVKLMEGGEKAAQHAYEKMSDLGDEISNVIKDEEEHEQALLTLLDEERLQYTGSIVLGLNDALVELTGALAGLTF ALQDTSLVALTGLITGFAAALSMASSEYLSTKAEPGAKNPVKASIYTGVAYILAVAVLIIPYFVLSNIYLSLAFAFAGAL LIVALFNFYVSVAKGVPFRSRFLEMAGLIVVVSGISFLAGLAMRFFFGIEV >Mature_291_residues MNTLNEQQTRLILGFQKNEITEHHIYKNLAKRIEGVKNRRIFAQISDDELRHYNIWKKYTQQDVAPSKFKIWFYSLISLL FGFTFAVKLMEGGEKAAQHAYEKMSDLGDEISNVIKDEEEHEQALLTLLDEERLQYTGSIVLGLNDALVELTGALAGLTF ALQDTSLVALTGLITGFAAALSMASSEYLSTKAEPGAKNPVKASIYTGVAYILAVAVLIIPYFVLSNIYLSLAFAFAGAL LIVALFNFYVSVAKGVPFRSRFLEMAGLIVVVSGISFLAGLAMRFFFGIEV
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32233; Mature: 32233
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLNEQQTRLILGFQKNEITEHHIYKNLAKRIEGVKNRRIFAQISDDELRHYNIWKKYT CCCCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH QQDVAPSKFKIWFYSLISLLFGFTFAVKLMEGGEKAAQHAYEKMSDLGDEISNVIKDEEE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH HEQALLTLLDEERLQYTGSIVLGLNDALVELTGALAGLTFALQDTSLVALTGLITGFAAA HHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LSMASSEYLSTKAEPGAKNPVKASIYTGVAYILAVAVLIIPYFVLSNIYLSLAFAFAGAL HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVALFNFYVSVAKGVPFRSRFLEMAGLIVVVSGISFLAGLAMRFFFGIEV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNTLNEQQTRLILGFQKNEITEHHIYKNLAKRIEGVKNRRIFAQISDDELRHYNIWKKYT CCCCCHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH QQDVAPSKFKIWFYSLISLLFGFTFAVKLMEGGEKAAQHAYEKMSDLGDEISNVIKDEEE HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHH HEQALLTLLDEERLQYTGSIVLGLNDALVELTGALAGLTFALQDTSLVALTGLITGFAAA HHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LSMASSEYLSTKAEPGAKNPVKASIYTGVAYILAVAVLIIPYFVLSNIYLSLAFAFAGAL HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVALFNFYVSVAKGVPFRSRFLEMAGLIVVVSGISFLAGLAMRFFFGIEV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA