| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
Click here to switch to the map view.
The map label for this gene is 193212262
Identifier: 193212262
GI number: 193212262
Start: 639744
End: 640484
Strand: Direct
Name: 193212262
Synonym: Cpar_0595
Alternate gene names: NA
Gene position: 639744-640484 (Clockwise)
Preceding gene: 193212261
Following gene: 193212263
Centisome position: 27.95
GC content: 56.41
Gene sequence:
>741_bases ATGCGTTCGCTCGCCATTCGCATCGCAGCCGTCACGGTATTGCTTTGTTGCCAGCCCTTCCATTCCGAAGCCCTTGCCTG GCATGACAAAACCCACCTGACCATAGCCGAAGCCGCCGGGCTCGATATCTGGTACAATGCCGTTGCAGCTGACGTGGCCA AATCGAAAGAGCCGTTCCGGGCGATTGAGGTTCCGAACCACTACTTTAGCAACAAGGCCAATAAAAAAGTTACGGCGGAG ATGGTCATGGCGCAGGCTGCTCGTTACAACCAACCGGATGACAAAGAGGGGCATCTCTATGGTGCAATCATCGGTTCGGT CAGAGAGTACTTCGCGCTGGCCCGAACCGGCAAATACGCCCGCTATCCGCTGGCCTACTCCGCCCACTACATCGCTGACC TCTCCATGCCGCTGCACAATGTTCCCTACGACGCGTTCAACAAAGCGCACCACACGATCAACGACGGTATCATTGAACGC AGTGTGCGTAATAACATCGGTTACATCCAGCGCAAAATGAAGCCGCCGGTTATCAACAGCGAAGAGGATCTGGCGCGTGA AATCGCTGTTGTCGCCGAATCGTCCCGGAAACTCGGCAACAGGATGAGACGTCAGAAGCGGGATATGACCGAAGAGGAGG CCTACAGTCAGGTAATCAAAAGCGCCGCGTTGTTGCACGCCGTGCTGGCCTGGACCGAGCGGGTCAATGCGGAGCAGGAG ATGGCTGTCGCAGGGGAATAG
Upstream 100 bases:
>100_bases CGGCCCGGCAATATTTCCGCGAATCCCTCCTCCATCGTTGCCGACTCCACATTCCTCTGTGTACCTTCTTTCATTGCACA ACATTTCAGAAGGAGTCATC
Downstream 100 bases:
>100_bases CGTGAGCGGAAATGTTTCAAGCAGGATTATAGCTTTATGAGCAAAACAGTCCTTATCACAGGCGCGTCGGGGTTTATCGG TTCGCATCTGGTAAAGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MRSLAIRIAAVTVLLCCQPFHSEALAWHDKTHLTIAEAAGLDIWYNAVAADVAKSKEPFRAIEVPNHYFSNKANKKVTAE MVMAQAARYNQPDDKEGHLYGAIIGSVREYFALARTGKYARYPLAYSAHYIADLSMPLHNVPYDAFNKAHHTINDGIIER SVRNNIGYIQRKMKPPVINSEEDLAREIAVVAESSRKLGNRMRRQKRDMTEEEAYSQVIKSAALLHAVLAWTERVNAEQE MAVAGE
Sequences:
>Translated_246_residues MRSLAIRIAAVTVLLCCQPFHSEALAWHDKTHLTIAEAAGLDIWYNAVAADVAKSKEPFRAIEVPNHYFSNKANKKVTAE MVMAQAARYNQPDDKEGHLYGAIIGSVREYFALARTGKYARYPLAYSAHYIADLSMPLHNVPYDAFNKAHHTINDGIIER SVRNNIGYIQRKMKPPVINSEEDLAREIAVVAESSRKLGNRMRRQKRDMTEEEAYSQVIKSAALLHAVLAWTERVNAEQE MAVAGE >Mature_246_residues MRSLAIRIAAVTVLLCCQPFHSEALAWHDKTHLTIAEAAGLDIWYNAVAADVAKSKEPFRAIEVPNHYFSNKANKKVTAE MVMAQAARYNQPDDKEGHLYGAIIGSVREYFALARTGKYARYPLAYSAHYIADLSMPLHNVPYDAFNKAHHTINDGIIER SVRNNIGYIQRKMKPPVINSEEDLAREIAVVAESSRKLGNRMRRQKRDMTEEEAYSQVIKSAALLHAVLAWTERVNAEQE MAVAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27668; Mature: 27668
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLAIRIAAVTVLLCCQPFHSEALAWHDKTHLTIAEAAGLDIWYNAVAADVAKSKEPFR CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHCCCCCE AIEVPNHYFSNKANKKVTAEMVMAQAARYNQPDDKEGHLYGAIIGSVREYFALARTGKYA EEECCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC RYPLAYSAHYIADLSMPLHNVPYDAFNKAHHTINDGIIERSVRNNIGYIQRKMKPPVINS CCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EEDLAREIAVVAESSRKLGNRMRRQKRDMTEEEAYSQVIKSAALLHAVLAWTERVNAEQE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH MAVAGE HHCCCC >Mature Secondary Structure MRSLAIRIAAVTVLLCCQPFHSEALAWHDKTHLTIAEAAGLDIWYNAVAADVAKSKEPFR CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHCCCCCE AIEVPNHYFSNKANKKVTAEMVMAQAARYNQPDDKEGHLYGAIIGSVREYFALARTGKYA EEECCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC RYPLAYSAHYIADLSMPLHNVPYDAFNKAHHTINDGIIERSVRNNIGYIQRKMKPPVINS CCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC EEDLAREIAVVAESSRKLGNRMRRQKRDMTEEEAYSQVIKSAALLHAVLAWTERVNAEQE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH MAVAGE HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA