| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211946
Identifier: 193211946
GI number: 193211946
Start: 289831
End: 292086
Strand: Direct
Name: 193211946
Synonym: Cpar_0272
Alternate gene names: NA
Gene position: 289831-292086 (Clockwise)
Preceding gene: 193211945
Following gene: 193211947
Centisome position: 12.66
GC content: 55.76
Gene sequence:
>2256_bases ATGGCTAATTTTTCTCTTTATATCTCGGGACAGACTGAACTGGGTGATGTTGCTGAGTTTTTCCAGAAACGCCTGATTGG CGAAGGTGAAACTCCCATCGCATTTTTTGACGGCGTTTTTTACGAATCTCATCAGGAGCGGGTAGGCAATATTGTCTATC AGGATTATCTGATCTTTTCTGACAAGGCGCTCTACCTCTGGGCGAGAGGGGCTTCGAAAGATTATCTCGATCGCTTCACG CTCGGCGCTGTATCGGTGAACAGCCGAAACAAGGATAGCGCGTTCGCGACCATGAACCTCAAAATACGGCGCGAGGGCAA AGAGCCGGTGTTCGTGATTTTCGACATGGTCGAAATTCGTGAAGCAGAAATGGTCATCAAGCTTCAAACCGCCGTCGAAT CAACCATAGAGGACTATCTCGGAGTCAATTACCGTCAGGAGATCCCTCCGGATGCAGCCGGCAGGATTCTTCAGGCTGCT CGGGCCGTCTGCCCGCCAAGGAACATCTCACTGCCTCTGGAGTCGCCTGAGGCGCCGCAGATGCCTGTCCCTGATGCCGG CATTGGTTATGGCCAGGATCTGCTCGAACAGTACCGTGCCATGGGCGGACAGCCCGGTGCGCAACAGGCTCCCTCTCAGG GATCACCGTATGGCGAACGCCCGCAGGCTGGCGGAATGGGCATGCCGGGTATCGGTGCCCCACCGTTTGCTCCGCGCGGC GGGCTCGAGTCGATGCTGCCTACCGATCCAGCCTCGTTGAAGCGGATTGCCGATCAGATCAAAAATATGGTTGGTGACGC GCCGTTCAAGTTGCGTGACCAGGTGATGAAAGATCTTCAGCATGTGCCCGGTGATGTGGCTACGGTGCTGACCGCCCTCA ACGAGCTGCTGGCCAATATCGCCGGCAACCCGATGGCCGAGCGTTTCGTTATGAATGCCATCAAAACGGCTGTGGTGAAC GATGGCATGATCGGTTCTCTTGGCAAAATCATCAAAATGACCGGTTTCGGCAGCGGTGGCGGCAAAAAAAGCTCGCAGCC CGCGTCTGACGGCCCCGCAGCCGGTGATGACCGTTCAGCTTCCAGACCGCGCAAAAGCCCGTTCGAGGAGGAACCTGACG ATAACTCGTCGACGATCAGGCGTAAGAAGATCAGCGTCAAGGATGACGAAGAGAGTTCTGTTGCCGATCTTTTTGCCGGG AGCGATGAGCCGATTACTTCACGTGAGGAGCGCAAGCCTGCCATTGACGATACCAGAGCCGATGGTGGCGGTCGCCGAAA GAAGCTCTCCATCAAGATGGAGGATGACAACGAGATCGCTCGCAAGCTGATGAGTTACGACGAGTCGGAGCGGGAAGCGC CGGTGTCCGAGCCTGAGCCGGTCAAGCCTGAATCTCCGGTGGCCAGTCAGCCGGTTGATAGCGGTTCAGGAGTGCGACGG AAAAAGGTCGCCATCAAAGCCGAAGAGGGGAGCGGCGCACGCGCTGATGTTGCACAAAAGCTGATGAGCTACGATGAAAC AACGCGAGGCGCGATCAATACACTCTCAAAATCCGATGAGCCGAAAGCCGAAACGGCGCCCGAGCTTGAGCCGGAAAAGC CGGTAAGGAAAAAGATCCAGATCGTCGCAGCCGAAGAGTCCGAATCGGACGTCGTTTCTGCATCGGAGCCAGAGCCGGAA GAGGATATCCCGGTGATTGAGATGGCTGCAATTGAAGCTGCATTGGAGCTGGAGGCTGAATCTGGCATCGAGCCAGAGTT GGCTGAGGCATCAGTTCCCGAACCCGAACCGGAAATCCCGGTGAGGAAAAAGCTTCAGGTTGTAGCATCCGATGAGCCGA ATGTTGAGGCCGAGCCTGAACCGGAAGCGCCCGAGACAAAGAAGGTGCAGGTTGTTGCATCGGAGGAATCGGCAACTGAG CTCAAACCCGAAGTCGCATCAGAGTCCGAACCGGAGGAGGAGGCTGCATCTGAGGCATCGGCCAGTGATGTTGTTGCGAA TGAAGCTGAGCCGGCAATTGCATCAGTTTCTGAAACATCGTCCGAATCTGAAGAGATTACTATTTCCGAAGAGGCGCTTT TTGTCGCTCTTGGCGAGGAACCGAAAGCAGAAAAGCGTTCGTCCGGCACGAACGAGTACATGACCATAGAATCTGACGAG CCGGAGAAAAAAATAGCAAGCGTGAAACCCACCGAACAGCAACGTCGTCCTTCTGGCAAGGCTGGCCGGAGCAAACGGCG GGGGAGAAAAGTCTGA
Upstream 100 bases:
>100_bases CACGGTTCAGCGTTACGTAATTTATTTTTGTTTTCATATTTTGTTGGTTCGACTATCGATGATGAACGGATTTCAACGGT AACGTGACCGGAAGCGGTAA
Downstream 100 bases:
>100_bases CGGCCAAAAGCCGACGGGAGAAAGACATTCAGTTTAAGTCAAGTTTTCACCATAGTTTTTCAACACCATGAGAATCATTC TTTACCTGGGCAAAGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 751; Mature: 750
Protein sequence:
>751_residues MANFSLYISGQTELGDVAEFFQKRLIGEGETPIAFFDGVFYESHQERVGNIVYQDYLIFSDKALYLWARGASKDYLDRFT LGAVSVNSRNKDSAFATMNLKIRREGKEPVFVIFDMVEIREAEMVIKLQTAVESTIEDYLGVNYRQEIPPDAAGRILQAA RAVCPPRNISLPLESPEAPQMPVPDAGIGYGQDLLEQYRAMGGQPGAQQAPSQGSPYGERPQAGGMGMPGIGAPPFAPRG GLESMLPTDPASLKRIADQIKNMVGDAPFKLRDQVMKDLQHVPGDVATVLTALNELLANIAGNPMAERFVMNAIKTAVVN DGMIGSLGKIIKMTGFGSGGGKKSSQPASDGPAAGDDRSASRPRKSPFEEEPDDNSSTIRRKKISVKDDEESSVADLFAG SDEPITSREERKPAIDDTRADGGGRRKKLSIKMEDDNEIARKLMSYDESEREAPVSEPEPVKPESPVASQPVDSGSGVRR KKVAIKAEEGSGARADVAQKLMSYDETTRGAINTLSKSDEPKAETAPELEPEKPVRKKIQIVAAEESESDVVSASEPEPE EDIPVIEMAAIEAALELEAESGIEPELAEASVPEPEPEIPVRKKLQVVASDEPNVEAEPEPEAPETKKVQVVASEESATE LKPEVASESEPEEEAASEASASDVVANEAEPAIASVSETSSESEEITISEEALFVALGEEPKAEKRSSGTNEYMTIESDE PEKKIASVKPTEQQRRPSGKAGRSKRRGRKV
Sequences:
>Translated_751_residues MANFSLYISGQTELGDVAEFFQKRLIGEGETPIAFFDGVFYESHQERVGNIVYQDYLIFSDKALYLWARGASKDYLDRFT LGAVSVNSRNKDSAFATMNLKIRREGKEPVFVIFDMVEIREAEMVIKLQTAVESTIEDYLGVNYRQEIPPDAAGRILQAA RAVCPPRNISLPLESPEAPQMPVPDAGIGYGQDLLEQYRAMGGQPGAQQAPSQGSPYGERPQAGGMGMPGIGAPPFAPRG GLESMLPTDPASLKRIADQIKNMVGDAPFKLRDQVMKDLQHVPGDVATVLTALNELLANIAGNPMAERFVMNAIKTAVVN DGMIGSLGKIIKMTGFGSGGGKKSSQPASDGPAAGDDRSASRPRKSPFEEEPDDNSSTIRRKKISVKDDEESSVADLFAG SDEPITSREERKPAIDDTRADGGGRRKKLSIKMEDDNEIARKLMSYDESEREAPVSEPEPVKPESPVASQPVDSGSGVRR KKVAIKAEEGSGARADVAQKLMSYDETTRGAINTLSKSDEPKAETAPELEPEKPVRKKIQIVAAEESESDVVSASEPEPE EDIPVIEMAAIEAALELEAESGIEPELAEASVPEPEPEIPVRKKLQVVASDEPNVEAEPEPEAPETKKVQVVASEESATE LKPEVASESEPEEEAASEASASDVVANEAEPAIASVSETSSESEEITISEEALFVALGEEPKAEKRSSGTNEYMTIESDE PEKKIASVKPTEQQRRPSGKAGRSKRRGRKV >Mature_750_residues ANFSLYISGQTELGDVAEFFQKRLIGEGETPIAFFDGVFYESHQERVGNIVYQDYLIFSDKALYLWARGASKDYLDRFTL GAVSVNSRNKDSAFATMNLKIRREGKEPVFVIFDMVEIREAEMVIKLQTAVESTIEDYLGVNYRQEIPPDAAGRILQAAR AVCPPRNISLPLESPEAPQMPVPDAGIGYGQDLLEQYRAMGGQPGAQQAPSQGSPYGERPQAGGMGMPGIGAPPFAPRGG LESMLPTDPASLKRIADQIKNMVGDAPFKLRDQVMKDLQHVPGDVATVLTALNELLANIAGNPMAERFVMNAIKTAVVND GMIGSLGKIIKMTGFGSGGGKKSSQPASDGPAAGDDRSASRPRKSPFEEEPDDNSSTIRRKKISVKDDEESSVADLFAGS DEPITSREERKPAIDDTRADGGGRRKKLSIKMEDDNEIARKLMSYDESEREAPVSEPEPVKPESPVASQPVDSGSGVRRK KVAIKAEEGSGARADVAQKLMSYDETTRGAINTLSKSDEPKAETAPELEPEKPVRKKIQIVAAEESESDVVSASEPEPEE DIPVIEMAAIEAALELEAESGIEPELAEASVPEPEPEIPVRKKLQVVASDEPNVEAEPEPEAPETKKVQVVASEESATEL KPEVASESEPEEEAASEASASDVVANEAEPAIASVSETSSESEEITISEEALFVALGEEPKAEKRSSGTNEYMTIESDEP EKKIASVKPTEQQRRPSGKAGRSKRRGRKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81129; Mature: 80998
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANFSLYISGQTELGDVAEFFQKRLIGEGETPIAFFDGVFYESHQERVGNIVYQDYLIFS CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHEEEEE DKALYLWARGASKDYLDRFTLGAVSVNSRNKDSAFATMNLKIRREGKEPVFVIFDMVEIR CCEEEEEECCCCHHHHHHHHHCEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEHHHHH EAEMVIKLQTAVESTIEDYLGVNYRQEIPPDAAGRILQAARAVCPPRNISLPLESPEAPQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC MPVPDAGIGYGQDLLEQYRAMGGQPGAQQAPSQGSPYGERPQAGGMGMPGIGAPPFAPRG CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GLESMLPTDPASLKRIADQIKNMVGDAPFKLRDQVMKDLQHVPGDVATVLTALNELLANI CCHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGNPMAERFVMNAIKTAVVNDGMIGSLGKIIKMTGFGSGGGKKSSQPASDGPAAGDDRSA CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCC SRPRKSPFEEEPDDNSSTIRRKKISVKDDEESSVADLFAGSDEPITSREERKPAIDDTRA CCCCCCCCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCCCC DGGGRRKKLSIKMEDDNEIARKLMSYDESEREAPVSEPEPVKPESPVASQPVDSGSGVRR CCCCCEEEEEEEECCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KKVAIKAEEGSGARADVAQKLMSYDETTRGAINTLSKSDEPKAETAPELEPEKPVRKKIQ EEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEE IVAAEESESDVVSASEPEPEEDIPVIEMAAIEAALELEAESGIEPELAEASVPEPEPEIP EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC VRKKLQVVASDEPNVEAEPEPEAPETKKVQVVASEESATELKPEVASESEPEEEAASEAS HHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCHHCCCCCCHHHHHHHCC ASDVVANEAEPAIASVSETSSESEEITISEEALFVALGEEPKAEKRSSGTNEYMTIESDE HHHHHHCCCCCHHHHHHHCCCCCCEEEEECCEEEEEECCCCCHHHHCCCCCCEEEECCCC PEKKIASVKPTEQQRRPSGKAGRSKRRGRKV CHHHHHCCCCCHHHHCCCCCCCCHHHCCCCC >Mature Secondary Structure ANFSLYISGQTELGDVAEFFQKRLIGEGETPIAFFDGVFYESHQERVGNIVYQDYLIFS CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHEEEEE DKALYLWARGASKDYLDRFTLGAVSVNSRNKDSAFATMNLKIRREGKEPVFVIFDMVEIR CCEEEEEECCCCHHHHHHHHHCEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEHHHHH EAEMVIKLQTAVESTIEDYLGVNYRQEIPPDAAGRILQAARAVCPPRNISLPLESPEAPQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC MPVPDAGIGYGQDLLEQYRAMGGQPGAQQAPSQGSPYGERPQAGGMGMPGIGAPPFAPRG CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GLESMLPTDPASLKRIADQIKNMVGDAPFKLRDQVMKDLQHVPGDVATVLTALNELLANI CCHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGNPMAERFVMNAIKTAVVNDGMIGSLGKIIKMTGFGSGGGKKSSQPASDGPAAGDDRSA CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCC SRPRKSPFEEEPDDNSSTIRRKKISVKDDEESSVADLFAGSDEPITSREERKPAIDDTRA CCCCCCCCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCCCC DGGGRRKKLSIKMEDDNEIARKLMSYDESEREAPVSEPEPVKPESPVASQPVDSGSGVRR CCCCCEEEEEEEECCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KKVAIKAEEGSGARADVAQKLMSYDETTRGAINTLSKSDEPKAETAPELEPEKPVRKKIQ EEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEE IVAAEESESDVVSASEPEPEEDIPVIEMAAIEAALELEAESGIEPELAEASVPEPEPEIP EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCC VRKKLQVVASDEPNVEAEPEPEAPETKKVQVVASEESATELKPEVASESEPEEEAASEAS HHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCHHHCCCHHCCCCCCHHHHHHHCC ASDVVANEAEPAIASVSETSSESEEITISEEALFVALGEEPKAEKRSSGTNEYMTIESDE HHHHHHCCCCCHHHHHHHCCCCCCEEEEECCEEEEEECCCCCHHHHCCCCCCEEEECCCC PEKKIASVKPTEQQRRPSGKAGRSKRRGRKV CHHHHHCCCCCHHHHCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA