Definition Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession NC_011027
Length 2,289,249

Click here to switch to the map view.

The map label for this gene is csmA [H]

Identifier: 193211945

GI number: 193211945

Start: 289342

End: 289581

Strand: Direct

Name: csmA [H]

Synonym: Cpar_0271

Alternate gene names: 193211945

Gene position: 289342-289581 (Clockwise)

Preceding gene: 193211944

Following gene: 193211946

Centisome position: 12.64

GC content: 51.67

Gene sequence:

>240_bases
ATGAGTGGAGGAGGCGTCTTTACTGACATCTTAGCCGCCGCAGGCCGCATTTTCGAAGTTATGGTCGAGGGTCACTGGGA
GACCGTCGGCATGCTTTTTGATTCTCTGGGCAAAGGCACCATGAGGATCAACCGCAATGCCTATGGTTCCATGGGTGGTG
GTAGCCTTCGTGGTTCTTCACCTGAGGTTTCCGGCTATGCTGTTCCGACCAAAGAAGTTGAATCGAAGTTTGCCAAATAA

Upstream 100 bases:

>100_bases
TCTTTTAATTTGTGTTTTTTCGTTTATTCGCTTATTTTTGTCTTAAGTCTCATTTTTGAATGTTGTTTTTTCTGTCAATT
AAATTCCAAAAGGAGGAGTT

Downstream 100 bases:

>100_bases
GCAAACCGTTCAGCAAGATTCTAAAAGCAGTGACAGGTTTTGCACCGTCACTGCTTTTTTAGTTTTATGCCGTTCCCGCA
TCGATTGCCTGCCTTTTGCC

Product: bacteriochlorophyll C binding protein

Products: NA

Alternate protein names: BChl c-binding; Chlorosome protein A [H]

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MSGGGVFTDILAAAGRIFEVMVEGHWETVGMLFDSLGKGTMRINRNAYGSMGGGSLRGSSPEVSGYAVPTKEVESKFAK

Sequences:

>Translated_79_residues
MSGGGVFTDILAAAGRIFEVMVEGHWETVGMLFDSLGKGTMRINRNAYGSMGGGSLRGSSPEVSGYAVPTKEVESKFAK
>Mature_78_residues
SGGGVFTDILAAAGRIFEVMVEGHWETVGMLFDSLGKGTMRINRNAYGSMGGGSLRGSSPEVSGYAVPTKEVESKFAK

Specific function: Component of the photosynthetic apparatus. The light harvesting B740 complex binds bacteriochlorophyll c [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Chlorosome, chlorosome envelope [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BChl C/E-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001470 [H]

Pfam domain/function: PF02043 Bac_chlorC [H]

EC number: NA

Molecular weight: Translated: 8290; Mature: 8158

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGGVFTDILAAAGRIFEVMVEGHWETVGMLFDSLGKGTMRINRNAYGSMGGGSLRGSS
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC
PEVSGYAVPTKEVESKFAK
CCCCCEECCHHHHHHHCCC
>Mature Secondary Structure 
SGGGVFTDILAAAGRIFEVMVEGHWETVGMLFDSLGKGTMRINRNAYGSMGGGSLRGSS
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCC
PEVSGYAVPTKEVESKFAK
CCCCCEECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA