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The map label for this gene is etfB [H]

Identifier: 193211777

GI number: 193211777

Start: 123702

End: 124493

Strand: Direct

Name: etfB [H]

Synonym: Cpar_0102

Alternate gene names: 193211777

Gene position: 123702-124493 (Clockwise)

Preceding gene: 193211776

Following gene: 193211778

Centisome position: 5.4

GC content: 59.72

Gene sequence:

>792_bases
ATGAATATTCTTGTCTGTATCAAACAGGTGCCAGACATGGCCGGGCACTTCGAACCGAATGAGGCCGCCACCTGGTTCGA
TGAGGCCGGACATGCCTGGAGGATGAACGAGTACGACACTTTTGCAGTCGAAGAGGCCGTGCGGCTGAAGGAGCAGCTCG
GCGGTGAGGCCGAGGTGACGGTGCTCTCGATCGGCCCGGCAAGGGTAGTTGAGACGATTCGCAAAGCCATCGCGATGGGG
TGCGACGAGGGCGTACACATCGACGATGCCGATGCTCCGGAGCGCGATCCCTGGCAGATCGCTTCGATGATTGCCGGGTT
TGCCGCCGGGCGCGGCTTCGACCTCGTTTTCACCGGAATGCAGTCCGAAGACCGCAGCTCGGCGCAGGTCGGCGTACTCA
TCGCTGAGCGGCTCGGCGTCCCCTGCGTGACCGGCATCACGGCCTTCGGATGGCGGGACGGTGAAATCACCGTCGAACGC
GAAATCGAGGGCGGAAGAAATTGCTCGATTCGCCTGAAGTCACCGGCTCTACTCACCTGTCAGCAGGGTCTCAATTCGCC
GCGTTACCCGAATCTGCCCAGCATCATGAAGGCCAAACGGAAGGCATTGACTATCCTCACTCCGGAAGAGCTCGGGCTTG
AAAAACCGAAGACTCGCTCAACGAAATTCCGACTTCACGAACGAAAAACCGCCGGTGTGGTGCTGGAGGGAGATGTCCAG
ATGCTTGCTGTTCAGGTGCGCGAAATTCTCGAAACGAAAACCGCTGTGCTCGGCAAGGGAGGCGCGCGATGA

Upstream 100 bases:

>100_bases
AAACACTTTTGCCGTAACCGAAACGGGTGGCGAGCGGCTGACGGAACTGGCCGATGACTTGGTTCAGCTTTAAGTTCAAG
GAAATTTGTATGATGTTGTC

Downstream 100 bases:

>100_bases
AGCTGCTGCTTGTTGGCGAGTACCGCGACGGACGGCTTGCCGCCGAAACCGCTGAGCTGTTCGGATTTGCTGCCCGGCTC
GATGCAGAAGTGAGCATGGT

Product: Electron transfer flavoprotein subunit alpha/beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNILVCIKQVPDMAGHFEPNEAATWFDEAGHAWRMNEYDTFAVEEAVRLKEQLGGEAEVTVLSIGPARVVETIRKAIAMG
CDEGVHIDDADAPERDPWQIASMIAGFAAGRGFDLVFTGMQSEDRSSAQVGVLIAERLGVPCVTGITAFGWRDGEITVER
EIEGGRNCSIRLKSPALLTCQQGLNSPRYPNLPSIMKAKRKALTILTPEELGLEKPKTRSTKFRLHERKTAGVVLEGDVQ
MLAVQVREILETKTAVLGKGGAR

Sequences:

>Translated_263_residues
MNILVCIKQVPDMAGHFEPNEAATWFDEAGHAWRMNEYDTFAVEEAVRLKEQLGGEAEVTVLSIGPARVVETIRKAIAMG
CDEGVHIDDADAPERDPWQIASMIAGFAAGRGFDLVFTGMQSEDRSSAQVGVLIAERLGVPCVTGITAFGWRDGEITVER
EIEGGRNCSIRLKSPALLTCQQGLNSPRYPNLPSIMKAKRKALTILTPEELGLEKPKTRSTKFRLHERKTAGVVLEGDVQ
MLAVQVREILETKTAVLGKGGAR
>Mature_263_residues
MNILVCIKQVPDMAGHFEPNEAATWFDEAGHAWRMNEYDTFAVEEAVRLKEQLGGEAEVTVLSIGPARVVETIRKAIAMG
CDEGVHIDDADAPERDPWQIASMIAGFAAGRGFDLVFTGMQSEDRSSAQVGVLIAERLGVPCVTGITAFGWRDGEITVER
EIEGGRNCSIRLKSPALLTCQQGLNSPRYPNLPSIMKAKRKALTILTPEELGLEKPKTRSTKFRLHERKTAGVVLEGDVQ
MLAVQVREILETKTAVLGKGGAR

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=254, Percent_Identity=37.4015748031496, Blast_Score=135, Evalue=3e-32,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=37.5527426160338, Blast_Score=129, Evalue=4e-30,
Organism=Escherichia coli, GI87081682, Length=243, Percent_Identity=30.0411522633745, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI2367123, Length=203, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082158, Length=129, Percent_Identity=32.5581395348837, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25141345, Length=256, Percent_Identity=33.203125, Blast_Score=114, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6321646, Length=241, Percent_Identity=31.5352697095436, Blast_Score=106, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24651147, Length=249, Percent_Identity=35.7429718875502, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24651145, Length=249, Percent_Identity=35.7429718875502, Blast_Score=119, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28729; Mature: 28729

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILVCIKQVPDMAGHFEPNEAATWFDEAGHAWRMNEYDTFAVEEAVRLKEQLGGEAEVT
CCEEEEEHHCCHHHCCCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEE
VLSIGPARVVETIRKAIAMGCDEGVHIDDADAPERDPWQIASMIAGFAAGRGFDLVFTGM
EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECC
QSEDRSSAQVGVLIAERLGVPCVTGITAFGWRDGEITVEREIEGGRNCSIRLKSPALLTC
CCCCCCCCHHHHHHHHHCCCCHHHCHHHCCCCCCCEEEEEECCCCCCEEEEECCCCEEEH
QQGLNSPRYPNLPSIMKAKRKALTILTPEELGLEKPKTRSTKFRLHERKTAGVVLEGDVQ
HHHCCCCCCCCCHHHHHHHHHEEEEECHHHHCCCCCCCCCHHEEEEECCCCCEEEECCHH
MLAVQVREILETKTAVLGKGGAR
HHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNILVCIKQVPDMAGHFEPNEAATWFDEAGHAWRMNEYDTFAVEEAVRLKEQLGGEAEVT
CCEEEEEHHCCHHHCCCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEE
VLSIGPARVVETIRKAIAMGCDEGVHIDDADAPERDPWQIASMIAGFAAGRGFDLVFTGM
EEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECC
QSEDRSSAQVGVLIAERLGVPCVTGITAFGWRDGEITVEREIEGGRNCSIRLKSPALLTC
CCCCCCCCHHHHHHHHHCCCCHHHCHHHCCCCCCCEEEEEECCCCCCEEEEECCCCEEEH
QQGLNSPRYPNLPSIMKAKRKALTILTPEELGLEKPKTRSTKFRLHERKTAGVVLEGDVQ
HHHCCCCCCCCCHHHHHHHHHEEEEECHHHHCCCCCCCCCHHEEEEECCCCCEEEECCHH
MLAVQVREILETKTAVLGKGGAR
HHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]