| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211734
Identifier: 193211734
GI number: 193211734
Start: 67653
End: 68471
Strand: Direct
Name: 193211734
Synonym: Cpar_0059
Alternate gene names: NA
Gene position: 67653-68471 (Clockwise)
Preceding gene: 193211733
Following gene: 193211736
Centisome position: 2.96
GC content: 56.53
Gene sequence:
>819_bases ATGAAAGCTATCTCCCGTCGATTGTTTGCCGCTGTGCTGGTGCCGGGTCTCTTGCTCTCGGCATGTGGCGACAAAAAAGA GGCCAATGCGCCCGGTTCAGCCGCCGTTGAGCAGGCCTCACCCGCGATTGCAGGTCCGTTTACCGGCGTCCTGACCATGA AAACCACCATGCCGAACGCAGGCACGAGCGACATGAAGCTCTATATCGGCCCGAAAGGAATGCGCGCAGAGAGCAAGACC GCCGTTGGCGGTGCCGGTACGATTTCAATGACCGTGCTGTCGCTTACGGATAAGCCCGATAAAATCTACATGATCAACGA AGCGGCCGGTTCCTGCATGGAGCTGGATGTGTCAAAAGTCAAAGAGGAGGCGCCCGACGATCCATATCTGGATGCGAAGA TCGAAAAGCTCGGCAAGGAGGAGGTGAACGGCTTCGACTGTAACCATGTCCGGATTTCATGGCCTGACAAACAGAACACC GTTGATCTCTGGGTGAGCAAGGATATTCTCGACTACTTCGCCTACGCGCGCATGCAGGGTTCGGAAGATCGCAAATATGA GCAGCTCGCCGAAAAACTCAAGGCTGCCGGTCTCGACGGCTTCCCCGTCAAGACGCTGATTTCTCCGGAAGGCGTGGTCA CCGAGCTGGTCAAGGCTGAGCGCACCACTCCGGACAGCGCCCTTTTCGAAGTTCCGGCCAACTGCACGAAGCTGGAAATC CCCACAATGCCAGACGGCCCGCAGGGGATGAGCGAAGAGAAGATGAAAGAGATGGAAGAGTTTGGCCGCCAGATGATGCA GCAGATGCAGCAGAAGTAA
Upstream 100 bases:
>100_bases GCAAGGATTTGCTTACATTAACCCATATGCTTCTTTTTTTCAGTCTTATCGTTGCTTCCGGTTCTTTTGAAACAACGCCA ACCCCTAAATCAAAAAGATC
Downstream 100 bases:
>100_bases GTCAGCATGACGATAAAGACGAAACCCCCGGCGATGTCGGGGGTTTCGTCTTTTATGGGGTGGCTGGGTTGGCGATTAAT TTGTCGCCGTCTCCATCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKAISRRLFAAVLVPGLLLSACGDKKEANAPGSAAVEQASPAIAGPFTGVLTMKTTMPNAGTSDMKLYIGPKGMRAESKT AVGGAGTISMTVLSLTDKPDKIYMINEAAGSCMELDVSKVKEEAPDDPYLDAKIEKLGKEEVNGFDCNHVRISWPDKQNT VDLWVSKDILDYFAYARMQGSEDRKYEQLAEKLKAAGLDGFPVKTLISPEGVVTELVKAERTTPDSALFEVPANCTKLEI PTMPDGPQGMSEEKMKEMEEFGRQMMQQMQQK
Sequences:
>Translated_272_residues MKAISRRLFAAVLVPGLLLSACGDKKEANAPGSAAVEQASPAIAGPFTGVLTMKTTMPNAGTSDMKLYIGPKGMRAESKT AVGGAGTISMTVLSLTDKPDKIYMINEAAGSCMELDVSKVKEEAPDDPYLDAKIEKLGKEEVNGFDCNHVRISWPDKQNT VDLWVSKDILDYFAYARMQGSEDRKYEQLAEKLKAAGLDGFPVKTLISPEGVVTELVKAERTTPDSALFEVPANCTKLEI PTMPDGPQGMSEEKMKEMEEFGRQMMQQMQQK >Mature_272_residues MKAISRRLFAAVLVPGLLLSACGDKKEANAPGSAAVEQASPAIAGPFTGVLTMKTTMPNAGTSDMKLYIGPKGMRAESKT AVGGAGTISMTVLSLTDKPDKIYMINEAAGSCMELDVSKVKEEAPDDPYLDAKIEKLGKEEVNGFDCNHVRISWPDKQNT VDLWVSKDILDYFAYARMQGSEDRKYEQLAEKLKAAGLDGFPVKTLISPEGVVTELVKAERTTPDSALFEVPANCTKLEI PTMPDGPQGMSEEKMKEMEEFGRQMMQQMQQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29594; Mature: 29594
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAISRRLFAAVLVPGLLLSACGDKKEANAPGSAAVEQASPAIAGPFTGVLTMKTTMPNA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCC GTSDMKLYIGPKGMRAESKTAVGGAGTISMTVLSLTDKPDKIYMINEAAGSCMELDVSKV CCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEHHHHHH KEEAPDDPYLDAKIEKLGKEEVNGFDCNHVRISWPDKQNTVDLWVSKDILDYFAYARMQG HHHCCCCCCCHHHHHHHCHHHCCCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHCC SEDRKYEQLAEKLKAAGLDGFPVKTLISPEGVVTELVKAERTTPDSALFEVPANCTKLEI CCCHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHHHHCCCCCHHEEECCCCCEEEEC PTMPDGPQGMSEEKMKEMEEFGRQMMQQMQQK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKAISRRLFAAVLVPGLLLSACGDKKEANAPGSAAVEQASPAIAGPFTGVLTMKTTMPNA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCC GTSDMKLYIGPKGMRAESKTAVGGAGTISMTVLSLTDKPDKIYMINEAAGSCMELDVSKV CCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEHHHHHH KEEAPDDPYLDAKIEKLGKEEVNGFDCNHVRISWPDKQNTVDLWVSKDILDYFAYARMQG HHHCCCCCCCHHHHHHHCHHHCCCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHCC SEDRKYEQLAEKLKAAGLDGFPVKTLISPEGVVTELVKAERTTPDSALFEVPANCTKLEI CCCHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHHHHCCCCCHHEEECCCCCEEEEC PTMPDGPQGMSEEKMKEMEEFGRQMMQQMQQK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA