| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193211736
Identifier: 193211736
GI number: 193211736
Start: 70214
End: 71671
Strand: Direct
Name: 193211736
Synonym: Cpar_0061
Alternate gene names: NA
Gene position: 70214-71671 (Clockwise)
Preceding gene: 193211734
Following gene: 193211737
Centisome position: 3.07
GC content: 57.89
Gene sequence:
>1458_bases ATGGCAAAGGTTGTCGTTTTGGGAGCTGGCGTTTCAGGGCATACCTGCGCCTCCTTCCTCAAGAAAAAGCTCGGGAAGAA CCACGAGGTGGTGGTGGTTTCGCCCAATAGCTATTATCAGTGGATTCCGTCGAACATCTGGGTCGGTGTCGGCCAGATGA CCATCGACGATGTTCGCTTCAAGCTGCACAAGGTTTATGATCGCTGGGGAATCGATTTCAAGCAGGCGAAAGCCGTTTCG ATCCATCCGGAGGGTGACGCCTCTATCGACAAAGGGTACGTCACGATCGAATACACCGATCCGGAGTACGCCGGTCAGAC CGAAATCGTCGATTACGACTATCTGGTCAACGCTACCGGTCCGAAGCTGAACTTCGAGGCGACCGAGGGGCTTGGCCCCG ACAAAAACAGCATGTCGGTCTGTACCTACAGCCACGCTGCCCATGCGTGGGAGGAGTTGCAGAAAAGCATCGAGAAGATG AAAGCCGGACAGAAGCAGCGCTTTCTCATCGGCACCGGCCATGCGATGGCTACCTGCCAGGGCGCGGCGTTCGAATATAT CCTGAATATCGCGCACGAAATCGCCACGCTTGGCCTGAGCCACATGGCGGAGATTACCTGGATTTCCAACGAGTACGAGC TGGGTGACTTCGGTATGGGTGGCGCGTTCATCAAGCGCGGTGGTTACATCACCCCGACCAAGGTGTTCACCGAGTCGCTG CTTGCCGAGTACGGCATCAAGTGGATTCGCCGGGCGGGCGTTTACAAGGTCGAGCCGGGCGTGGCGCATTACGAAACGCT CGATGGCGAAATGCTTTCGCAGGAGTTCGATTTCTCGATGCTGATTCCGTCGTTCTCGGGGGTCGGCCTTACCGCGTTCG ATCGTGAGGGTAACGACATCACCGACCAGATGTTCCTGCCCAACAAGTTCATGAAGGTTGATGCTGACTACACGCCCAAG TCGTTCGATGAATGGACGGCTGCCGACTGGCCGACAAAGTACCAGACGCCGATGTACGACAACATCTACGCTGCGGGTAT CGCTTTTGCTCCGCCGCACCCGATCTCCAAGCCCCTGAAAAGCGAGAATGGCCGCCAGATATTCCCGACTCCGCCGCGCA CCGGAATGCCGTCGGGCGTTATCGGAAAGATCATCGCGCTCAACATCGCCGAGCAGGTCAAGGGCGGCCACAAAGAGCAC CACCATACCGCCTCGATGGCGCGCATGGGCGCGGCCTGTATCGTATCCGGCGGCTTCGGCTCCTTCGACGGTCTCGGTGC GTCGATGACCGTCTTCCCGATCGTGCCTGACTGGGAGAAGTATCCCGAGTGGGGCCGCGATATGAACTATTCTGTTGGCG AGGCCGGTCTTGCGGGCCACTGGCTGAAGTTCATTCTGCACTACCTGTTCTTCCACAAGGCGAAGGGCTACCCGTTCTGG TGGCTCATTCCCGAGTGA
Upstream 100 bases:
>100_bases GACGTGAACGTTGAAATGGCTACGAGGAACGACCTCTTGACGGTGGTTTTGGCTTCCTGTGATGGACATTTCGTTTAACA ATTGAAACTGCACAATCAGT
Downstream 100 bases:
>100_bases TCGAGCTGTTGCGGGCCACGATAGCTGCGTTGGGTGGTGCTCGGAATCCTCACGTACTGTATGTACGCTCCGGGTTCTCT GTTCCGTCCGCCTTGCTCTC
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Quinone Reductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Sulfide-Quinone Oxidoreductase
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MAKVVVLGAGVSGHTCASFLKKKLGKNHEVVVVSPNSYYQWIPSNIWVGVGQMTIDDVRFKLHKVYDRWGIDFKQAKAVS IHPEGDASIDKGYVTIEYTDPEYAGQTEIVDYDYLVNATGPKLNFEATEGLGPDKNSMSVCTYSHAAHAWEELQKSIEKM KAGQKQRFLIGTGHAMATCQGAAFEYILNIAHEIATLGLSHMAEITWISNEYELGDFGMGGAFIKRGGYITPTKVFTESL LAEYGIKWIRRAGVYKVEPGVAHYETLDGEMLSQEFDFSMLIPSFSGVGLTAFDREGNDITDQMFLPNKFMKVDADYTPK SFDEWTAADWPTKYQTPMYDNIYAAGIAFAPPHPISKPLKSENGRQIFPTPPRTGMPSGVIGKIIALNIAEQVKGGHKEH HHTASMARMGAACIVSGGFGSFDGLGASMTVFPIVPDWEKYPEWGRDMNYSVGEAGLAGHWLKFILHYLFFHKAKGYPFW WLIPE
Sequences:
>Translated_485_residues MAKVVVLGAGVSGHTCASFLKKKLGKNHEVVVVSPNSYYQWIPSNIWVGVGQMTIDDVRFKLHKVYDRWGIDFKQAKAVS IHPEGDASIDKGYVTIEYTDPEYAGQTEIVDYDYLVNATGPKLNFEATEGLGPDKNSMSVCTYSHAAHAWEELQKSIEKM KAGQKQRFLIGTGHAMATCQGAAFEYILNIAHEIATLGLSHMAEITWISNEYELGDFGMGGAFIKRGGYITPTKVFTESL LAEYGIKWIRRAGVYKVEPGVAHYETLDGEMLSQEFDFSMLIPSFSGVGLTAFDREGNDITDQMFLPNKFMKVDADYTPK SFDEWTAADWPTKYQTPMYDNIYAAGIAFAPPHPISKPLKSENGRQIFPTPPRTGMPSGVIGKIIALNIAEQVKGGHKEH HHTASMARMGAACIVSGGFGSFDGLGASMTVFPIVPDWEKYPEWGRDMNYSVGEAGLAGHWLKFILHYLFFHKAKGYPFW WLIPE >Mature_484_residues AKVVVLGAGVSGHTCASFLKKKLGKNHEVVVVSPNSYYQWIPSNIWVGVGQMTIDDVRFKLHKVYDRWGIDFKQAKAVSI HPEGDASIDKGYVTIEYTDPEYAGQTEIVDYDYLVNATGPKLNFEATEGLGPDKNSMSVCTYSHAAHAWEELQKSIEKMK AGQKQRFLIGTGHAMATCQGAAFEYILNIAHEIATLGLSHMAEITWISNEYELGDFGMGGAFIKRGGYITPTKVFTESLL AEYGIKWIRRAGVYKVEPGVAHYETLDGEMLSQEFDFSMLIPSFSGVGLTAFDREGNDITDQMFLPNKFMKVDADYTPKS FDEWTAADWPTKYQTPMYDNIYAAGIAFAPPHPISKPLKSENGRQIFPTPPRTGMPSGVIGKIIALNIAEQVKGGHKEHH HTASMARMGAACIVSGGFGSFDGLGASMTVFPIVPDWEKYPEWGRDMNYSVGEAGLAGHWLKFILHYLFFHKAKGYPFWW LIPE
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53893; Mature: 53762
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVVVLGAGVSGHTCASFLKKKLGKNHEVVVVSPNSYYQWIPSNIWVGVGQMTIDDVRF CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEECCCEEHHHHHH KLHKVYDRWGIDFKQAKAVSIHPEGDASIDKGYVTIEYTDPEYAGQTEIVDYDYLVNATG HHHHHHHHHCCCHHHCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCC PKLNFEATEGLGPDKNSMSVCTYSHAAHAWEELQKSIEKMKAGQKQRFLIGTGHAMATCQ CEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHEEEC GAAFEYILNIAHEIATLGLSHMAEITWISNEYELGDFGMGGAFIKRGGYITPTKVFTESL CHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCCCHHHHCCCCCCHHHHHHHHH LAEYGIKWIRRAGVYKVEPGVAHYETLDGEMLSQEFDFSMLIPSFSGVGLTAFDREGNDI HHHHHHHHHHHCCCEEECCCCCHHHHCCHHHHHHHCCCEEECCCCCCCCEEEECCCCCCC TDQMFLPNKFMKVDADYTPKSFDEWTAADWPTKYQTPMYDNIYAAGIAFAPPHPISKPLK CHHEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEECCCCCCCCCCCC SENGRQIFPTPPRTGMPSGVIGKIIALNIAEQVKGGHKEHHHTASMARMGAACIVSGGFG CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCC SFDGLGASMTVFPIVPDWEKYPEWGRDMNYSVGEAGLAGHWLKFILHYLFFHKAKGYPFW CCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE WLIPE EEECC >Mature Secondary Structure AKVVVLGAGVSGHTCASFLKKKLGKNHEVVVVSPNSYYQWIPSNIWVGVGQMTIDDVRF CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEECCCEEHHHHHH KLHKVYDRWGIDFKQAKAVSIHPEGDASIDKGYVTIEYTDPEYAGQTEIVDYDYLVNATG HHHHHHHHHCCCHHHCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCC PKLNFEATEGLGPDKNSMSVCTYSHAAHAWEELQKSIEKMKAGQKQRFLIGTGHAMATCQ CEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHEEEC GAAFEYILNIAHEIATLGLSHMAEITWISNEYELGDFGMGGAFIKRGGYITPTKVFTESL CHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCCCHHHHCCCCCCHHHHHHHHH LAEYGIKWIRRAGVYKVEPGVAHYETLDGEMLSQEFDFSMLIPSFSGVGLTAFDREGNDI HHHHHHHHHHHCCCEEECCCCCHHHHCCHHHHHHHCCCEEECCCCCCCCEEEECCCCCCC TDQMFLPNKFMKVDADYTPKSFDEWTAADWPTKYQTPMYDNIYAAGIAFAPPHPISKPLK CHHEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEECCCCCCCCCCCC SENGRQIFPTPPRTGMPSGVIGKIIALNIAEQVKGGHKEHHHTASMARMGAACIVSGGFG CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCC SFDGLGASMTVFPIVPDWEKYPEWGRDMNYSVGEAGLAGHWLKFILHYLFFHKAKGYPFW CCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE WLIPE EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA