| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213750
Identifier: 193213750
GI number: 193213750
Start: 41348
End: 42292
Strand: Direct
Name: 193213750
Synonym: Ctha_0030
Alternate gene names: NA
Gene position: 41348-42292 (Clockwise)
Preceding gene: 193213749
Following gene: 193213751
Centisome position: 1.26
GC content: 46.24
Gene sequence:
>945_bases ATGCGCAAGATTTTTACCGTGCTCTGTGGATTGCTTTTGCTGGCAACGCCACTTTTTGCTCAAGATAAAGTTTATGATTT TCTAAATTTAGAAAGAAGTGCCAAAGTTGCAGCGCTGGGCGGAAACAGCGTTTCGTTTATCGGCGACTTAAACGCATTTT TTCAAAATCCAGCTGTTTTGAACAGCAACACCAATCGGCGTGGGGCATTTAGTTTTCAAAAGCATTTGATGGATATCAAT TCCGGTTTTGCCGTCTACGGACGCTCCATTGAATCGATTGGCGATTTTGCCGCAGGCGTTTCTTATGTAAACTACGGCAG CTTCGACGAAACCGATGAGCTTGGCAATATTATCGGATCATTTGCCGCGCAAGATTTGGCGTTGCAGATTGGCTATGCGT TTGATTTGGAGGAGTATGATTACGGCTACTTGCGCGCCGGCATTTCGTTAAAGTATATTTATTCCAACATTGCGGACTAC ACGTCTTCGGCGTTGGCGTTAGACGCAGGCATCGTTTTAGTCATTCCCGAGAGCGATGTTGAAATTGGCTTTGCCTTGAC AAACTACGGCTGGCAACTTGCAAAATATGACGCAGCATCAGAGGATTTGCCTACCGATATGCGCCTTGCCTTGACAACAC GCCCGGAAGGCCTGCCGCTGGCACTTACAATCGGCCTTGTCCAACTCAACAACGATTTCAGCTTGACGGAAAAAGTGAAA AATTTCACCATTGGCGGCGAATTTTCTTTTGGGGAATTTGTTAGGTTTCGGTTAGGATTTAATAATGCCCTTCGCAACGA TGTCAAAAGCGGAGAGAACGCCGGCATGGTGGGCGCATCTGCGGGCTTAGGAATCTTGTATCGCGATTTTCACTTTGATT ATTCCTACTCTTCATGGGGCTCGATTGGCGCGCTGCATCAATTCTCTATTTCCACAACATTGTAG
Upstream 100 bases:
>100_bases ACCTTAGATGAAAAGGCTATCGCATGGCAATGGATTTCTTTCAAAGAGAAGCTATCTTCCTCTGAAAATTGTAGAACAGG TGAAATTTAACCCTTAGCAC
Downstream 100 bases:
>100_bases ATTTATCAGGCATTTTTGCTCGTCAACTGCAAAAAAAACAAAAAAAGTGACCGCAAAACACCTTACAAACAGGTCGCTCA TCGCATTCTAAGTTGTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MRKIFTVLCGLLLLATPLFAQDKVYDFLNLERSAKVAALGGNSVSFIGDLNAFFQNPAVLNSNTNRRGAFSFQKHLMDIN SGFAVYGRSIESIGDFAAGVSYVNYGSFDETDELGNIIGSFAAQDLALQIGYAFDLEEYDYGYLRAGISLKYIYSNIADY TSSALALDAGIVLVIPESDVEIGFALTNYGWQLAKYDAASEDLPTDMRLALTTRPEGLPLALTIGLVQLNNDFSLTEKVK NFTIGGEFSFGEFVRFRLGFNNALRNDVKSGENAGMVGASAGLGILYRDFHFDYSYSSWGSIGALHQFSISTTL
Sequences:
>Translated_314_residues MRKIFTVLCGLLLLATPLFAQDKVYDFLNLERSAKVAALGGNSVSFIGDLNAFFQNPAVLNSNTNRRGAFSFQKHLMDIN SGFAVYGRSIESIGDFAAGVSYVNYGSFDETDELGNIIGSFAAQDLALQIGYAFDLEEYDYGYLRAGISLKYIYSNIADY TSSALALDAGIVLVIPESDVEIGFALTNYGWQLAKYDAASEDLPTDMRLALTTRPEGLPLALTIGLVQLNNDFSLTEKVK NFTIGGEFSFGEFVRFRLGFNNALRNDVKSGENAGMVGASAGLGILYRDFHFDYSYSSWGSIGALHQFSISTTL >Mature_314_residues MRKIFTVLCGLLLLATPLFAQDKVYDFLNLERSAKVAALGGNSVSFIGDLNAFFQNPAVLNSNTNRRGAFSFQKHLMDIN SGFAVYGRSIESIGDFAAGVSYVNYGSFDETDELGNIIGSFAAQDLALQIGYAFDLEEYDYGYLRAGISLKYIYSNIADY TSSALALDAGIVLVIPESDVEIGFALTNYGWQLAKYDAASEDLPTDMRLALTTRPEGLPLALTIGLVQLNNDFSLTEKVK NFTIGGEFSFGEFVRFRLGFNNALRNDVKSGENAGMVGASAGLGILYRDFHFDYSYSSWGSIGALHQFSISTTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34261; Mature: 34261
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIFTVLCGLLLLATPLFAQDKVYDFLNLERSAKVAALGGNSVSFIGDLNAFFQNPAVL CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEECHHHHHCCCEEE NSNTNRRGAFSFQKHLMDINSGFAVYGRSIESIGDFAAGVSYVNYGSFDETDELGNIIGS CCCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH FAAQDLALQIGYAFDLEEYDYGYLRAGISLKYIYSNIADYTSSALALDAGIVLVIPESDV HHHHHEEEEEEEEECCCCCCCCEEEECCEEEHHHHHHHHHHCCCEEECCCEEEEECCCCC EIGFALTNYGWQLAKYDAASEDLPTDMRLALTTRPEGLPLALTIGLVQLNNDFSLTEKVK EEEEEEECCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCHHHHHHH NFTIGGEFSFGEFVRFRLGFNNALRNDVKSGENAGMVGASAGLGILYRDFHFDYSYSSWG HEECCCCCCHHHEEEEEECCCHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCCC SIGALHQFSISTTL CCCCEEEEEEECCC >Mature Secondary Structure MRKIFTVLCGLLLLATPLFAQDKVYDFLNLERSAKVAALGGNSVSFIGDLNAFFQNPAVL CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEECHHHHHCCCEEE NSNTNRRGAFSFQKHLMDINSGFAVYGRSIESIGDFAAGVSYVNYGSFDETDELGNIIGS CCCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH FAAQDLALQIGYAFDLEEYDYGYLRAGISLKYIYSNIADYTSSALALDAGIVLVIPESDV HHHHHEEEEEEEEECCCCCCCCEEEECCEEEHHHHHHHHHHCCCEEECCCEEEEECCCCC EIGFALTNYGWQLAKYDAASEDLPTDMRLALTTRPEGLPLALTIGLVQLNNDFSLTEKVK EEEEEEECCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCHHHHHHH NFTIGGEFSFGEFVRFRLGFNNALRNDVKSGENAGMVGASAGLGILYRDFHFDYSYSSWG HEECCCCCCHHHEEEEEECCCHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCCC SIGALHQFSISTTL CCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA