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The map label for this gene is gpsA [H]

Identifier: 193213749

GI number: 193213749

Start: 40082

End: 41068

Strand: Direct

Name: gpsA [H]

Synonym: Ctha_0029

Alternate gene names: 193213749

Gene position: 40082-41068 (Clockwise)

Preceding gene: 193213748

Following gene: 193213750

Centisome position: 1.22

GC content: 49.95

Gene sequence:

>987_bases
TTGGCGCAGGCAGTTGGGGAACCACGCTTGCCGTGCTACTCGCCAAAAAAGGCTTTCCGATTACTACTTTGGGCTTATGG
CGCTTCGTTCGCAGAAAAACTCCAACGCGAACGCGAAAACACCGTTTATTTAAAAGGCATCCCTTTTCCTGAAAATATCC
AGATAACCAATAGTGAGGCGCTCGCTGCGGAAAGCGCGGACATGCTTGTGGTTGCCACACCGGCACAAGCCGTTAGGGAA
ACGCTACACCGAATTCATCAAACAGCGTTGTCTGGCAAAACACTCGTCAATCTCTCCAAAGGCATCGAAGTAAAAACCGG
CTTACGAATTTCACAGGTCATTCGTCAGGTTCATCCAGAAGTTCAGGATGAGCAAATTGCGATTCTCTATGGGCCGAGTC
ACGCCGAAGAAGTTTGCACGGAGCATCCTACCACGGTTGTAGCCGCGTCGACGTGCCTGGAAACAGCAAAGCTTGTTCAA
GATACTTTTATAACACCCATGTTTCGAGTCTATGTAAACGACGATGTCATTGGCGTGGAAATCGGCGGTTCGGTCAAAAA
TATCATGGCCATTGCTGCTGGAATTAGCGACGGATTGGGTTTTGGCGACAATGCCAAAGCAGCCATTATCACGCGCGGCA
TAGCTGAAATTTCTCGTTTGGGTGCTCGCCTTGGTGCCAATCCGCTCACTTTTGCCGGACTTGCCGGCATTGGCGATTTG
GTGGTTACCTGCTCCAGTCGCCATAGCCGAAACCGCTATGTTGGCGAAATGATTGGCAAAGGCAAAAGCTTGGACGAAAT
TATTCAAAGCATGGAGATGATCGCCGAAGGCGTTGAAACTACCCGCGCAGTGGCCGCGCTATCCAAAGAGCTGAATGTAG
ACATGCCAATCACGCAAAGTGTTTATGAAATGCTTTTTGAAGGCAAGCCGGTCAAGCAAGCCGTCTATGAGCTCATGACG
CGCGATCCCAAGTTTGAGCTTAGCTAA

Upstream 100 bases:

>100_bases
GCTTGAAAAAGCTTCGTTTCGTTCGAACTTAACGGCTTTTGAGATAGCCTTTTCTCTGCTTTTGAATTGATAGACACGAT
CAGGATGAATATTTCAGTTC

Downstream 100 bases:

>100_bases
ACGCCTTTCTGCCAACACATTTCCCCTACTTCAAAGACCGGATTTGCTGGATTGCTCCGCCATTTTGCCTGATTTTTTTC
TTTTCCACATTTCCGACCGC

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MAQAVGEPRLPCYSPKKAFRLLLWAYGASFAEKLQRERENTVYLKGIPFPENIQITNSEALAAESADMLVVATPAQAVRE
TLHRIHQTALSGKTLVNLSKGIEVKTGLRISQVIRQVHPEVQDEQIAILYGPSHAEEVCTEHPTTVVAASTCLETAKLVQ
DTFITPMFRVYVNDDVIGVEIGGSVKNIMAIAAGISDGLGFGDNAKAAIITRGIAEISRLGARLGANPLTFAGLAGIGDL
VVTCSSRHSRNRYVGEMIGKGKSLDEIIQSMEMIAEGVETTRAVAALSKELNVDMPITQSVYEMLFEGKPVKQAVYELMT
RDPKFELS

Sequences:

>Translated_328_residues
MAQAVGEPRLPCYSPKKAFRLLLWAYGASFAEKLQRERENTVYLKGIPFPENIQITNSEALAAESADMLVVATPAQAVRE
TLHRIHQTALSGKTLVNLSKGIEVKTGLRISQVIRQVHPEVQDEQIAILYGPSHAEEVCTEHPTTVVAASTCLETAKLVQ
DTFITPMFRVYVNDDVIGVEIGGSVKNIMAIAAGISDGLGFGDNAKAAIITRGIAEISRLGARLGANPLTFAGLAGIGDL
VVTCSSRHSRNRYVGEMIGKGKSLDEIIQSMEMIAEGVETTRAVAALSKELNVDMPITQSVYEMLFEGKPVKQAVYELMT
RDPKFELS
>Mature_327_residues
AQAVGEPRLPCYSPKKAFRLLLWAYGASFAEKLQRERENTVYLKGIPFPENIQITNSEALAAESADMLVVATPAQAVRET
LHRIHQTALSGKTLVNLSKGIEVKTGLRISQVIRQVHPEVQDEQIAILYGPSHAEEVCTEHPTTVVAASTCLETAKLVQD
TFITPMFRVYVNDDVIGVEIGGSVKNIMAIAAGISDGLGFGDNAKAAIITRGIAEISRLGARLGANPLTFAGLAGIGDLV
VTCSSRHSRNRYVGEMIGKGKSLDEIIQSMEMIAEGVETTRAVAALSKELNVDMPITQSVYEMLFEGKPVKQAVYELMTR
DPKFELS

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=318, Percent_Identity=30.188679245283, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI24307999, Length=318, Percent_Identity=31.1320754716981, Blast_Score=130, Evalue=2e-30,
Organism=Escherichia coli, GI1790037, Length=316, Percent_Identity=38.6075949367089, Blast_Score=226, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17507425, Length=307, Percent_Identity=29.6416938110749, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI32564399, Length=257, Percent_Identity=31.1284046692607, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI193210136, Length=266, Percent_Identity=30.4511278195489, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI32564403, Length=266, Percent_Identity=30.4511278195489, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI193210134, Length=205, Percent_Identity=33.1707317073171, Blast_Score=92, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6320181, Length=314, Percent_Identity=26.4331210191083, Blast_Score=97, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6324513, Length=309, Percent_Identity=26.8608414239482, Blast_Score=96, Evalue=9e-21,
Organism=Drosophila melanogaster, GI22026922, Length=312, Percent_Identity=27.5641025641026, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI17136200, Length=271, Percent_Identity=31.7343173431734, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17136202, Length=271, Percent_Identity=31.7343173431734, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17136204, Length=271, Percent_Identity=31.7343173431734, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI45551945, Length=260, Percent_Identity=26.5384615384615, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648969, Length=260, Percent_Identity=26.5384615384615, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281362270, Length=260, Percent_Identity=26.5384615384615, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 35558; Mature: 35427

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAVGEPRLPCYSPKKAFRLLLWAYGASFAEKLQRERENTVYLKGIPFPENIQITNSEA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCHH
LAAESADMLVVATPAQAVRETLHRIHQTALSGKTLVNLSKGIEVKTGLRISQVIRQVHPE
HHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCHHHHHHHHHCCC
VQDEQIAILYGPSHAEEVCTEHPTTVVAASTCLETAKLVQDTFITPMFRVYVNDDVIGVE
CCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEE
IGGSVKNIMAIAAGISDGLGFGDNAKAAIITRGIAEISRLGARLGANPLTFAGLAGIGDL
ECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VVTCSSRHSRNRYVGEMIGKGKSLDEIIQSMEMIAEGVETTRAVAALSKELNVDMPITQS
EEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VYEMLFEGKPVKQAVYELMTRDPKFELS
HHHHHHCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AQAVGEPRLPCYSPKKAFRLLLWAYGASFAEKLQRERENTVYLKGIPFPENIQITNSEA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCHH
LAAESADMLVVATPAQAVRETLHRIHQTALSGKTLVNLSKGIEVKTGLRISQVIRQVHPE
HHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCHHHHHHHHHCCC
VQDEQIAILYGPSHAEEVCTEHPTTVVAASTCLETAKLVQDTFITPMFRVYVNDDVIGVE
CCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEE
IGGSVKNIMAIAAGISDGLGFGDNAKAAIITRGIAEISRLGARLGANPLTFAGLAGIGDL
ECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VVTCSSRHSRNRYVGEMIGKGKSLDEIIQSMEMIAEGVETTRAVAALSKELNVDMPITQS
EEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VYEMLFEGKPVKQAVYELMTRDPKFELS
HHHHHHCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA