| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291583
Identifier: 192291583
GI number: 192291583
Start: 3458113
End: 3458430
Strand: Reverse
Name: 192291583
Synonym: Rpal_3210
Alternate gene names: NA
Gene position: 3458430-3458113 (Counterclockwise)
Preceding gene: 192291584
Following gene: 192291582
Centisome position: 60.21
GC content: 65.41
Gene sequence:
>318_bases ATGGTCACCCGCAGTCGCCTCAAATCGATCCTCGCCGGCATCGCGCTGTACGCGATCGCCGCCGCTGTGATCGGCTATTT CGGCGTCAACGCCTATACCGGCCGCTACGGCCTGACGGCGCAGCAGGAGCTCGACCAGGAAATCACCGCGCTTACCGCGG AACTGGTGCAACTCCGTCAGCAGCGTGCCGAGGCCGAGCAGCGAGTCTCGCTGCTGCGCTCCGACCGGATCGACCCGGAT ATGCTCGACGAACGCGTGCGCTATCAGCTCGACTTCGCCAATCCGGCGGACTTGGTGCGGATGCTACCCCAGCGCTGA
Upstream 100 bases:
>100_bases CAGTACAAATAACGCCCGACACCTGTCCCGCCGGTTGTAAAGCTGGCGGGACAGCTGCCGCGTTAGCCGCGCGTTAACCG CGCTGTCCCATGGTCCGGCC
Downstream 100 bases:
>100_bases GTGCGCAAATTCCAAAAATCTGGACGAACGATTTCGAAAGTTTCGTATCGCTGCACTGCGGCATATTGATTTGCGCGCAG CGACATAGCGATCCTTTCAT
Product: Septum formation initiator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MVTRSRLKSILAGIALYAIAAAVIGYFGVNAYTGRYGLTAQQELDQEITALTAELVQLRQQRAEAEQRVSLLRSDRIDPD MLDERVRYQLDFANPADLVRMLPQR
Sequences:
>Translated_105_residues MVTRSRLKSILAGIALYAIAAAVIGYFGVNAYTGRYGLTAQQELDQEITALTAELVQLRQQRAEAEQRVSLLRSDRIDPD MLDERVRYQLDFANPADLVRMLPQR >Mature_105_residues MVTRSRLKSILAGIALYAIAAAVIGYFGVNAYTGRYGLTAQQELDQEITALTAELVQLRQQRAEAEQRVSLLRSDRIDPD MLDERVRYQLDFANPADLVRMLPQR
Specific function: Unknown
COG id: COG2919
COG function: function code D; Septum formation initiator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11869; Mature: 11869
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTRSRLKSILAGIALYAIAAAVIGYFGVNAYTGRYGLTAQQELDQEITALTAELVQLRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QRAEAEQRVSLLRSDRIDPDMLDERVRYQLDFANPADLVRMLPQR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCC >Mature Secondary Structure MVTRSRLKSILAGIALYAIAAAVIGYFGVNAYTGRYGLTAQQELDQEITALTAELVQLRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QRAEAEQRVSLLRSDRIDPDMLDERVRYQLDFANPADLVRMLPQR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA