| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is yieF [H]
Identifier: 192291584
GI number: 192291584
Start: 3458519
End: 3459079
Strand: Reverse
Name: yieF [H]
Synonym: Rpal_3211
Alternate gene names: 192291584
Gene position: 3459079-3458519 (Counterclockwise)
Preceding gene: 192291585
Following gene: 192291583
Centisome position: 60.22
GC content: 63.81
Gene sequence:
>561_bases ATGGCCCCACCATATCGCGTCGCCGTCGTCGTCGGCAGTTTGCGCAAGCAGGCGTATTCACTGCGCACCGCGCAGGCCCT GAGCAAGCTCGCGCCCGACACGCTGAAGCTCGACATCGTCACGCTGCACGGCCTGTCGATGTACAATCAGGATCTCGAGA CCGACGCGCCGCCTGCCGATTGGACCGCATTCCGCGACAGCATCAAGGCGTCCGATGCCGTGCTGTTCGTGACGCCGGAA TACAACCGCTCGATTCCCGGCGTGCTGAAGAACGCCATCGACGTCGGTTCGCGTCCGTACGGCAAGAGCTGCTTCGACAA GAAGCCGGCCGGTGTGCTGTCGAACTCGCCCGGCGCCATCGGCGGCTTCGGCGCCAACCACCATTTGCGGCAGTGCCTGG TGTTTCTCAACATGCCGACGCTGCAGCAGCCGGAGGCTTATGTCGGCGGCATCGGCGATGCGTTTGGCGAGGACGGTGCG CTGGTCAAGGACTCGCTCCGCGAGTTCCTGCAGAAGTACATCGACGCCTTCGCCGGCTTCGTCGCCCAGCAGTACAAATA A
Upstream 100 bases:
>100_bases ACCACGTCATCGCCGGACGACTTTCGCATGTTGCGCTTTCTCCGTCATCGCAGCGGTCTAGGCTCGTCGCGACTGTTCAT TGATTAACGGAGGAATTTGA
Downstream 100 bases:
>100_bases CGCCCGACACCTGTCCCGCCGGTTGTAAAGCTGGCGGGACAGCTGCCGCGTTAGCCGCGCGTTAACCGCGCTGTCCCATG GTCCGGCCATGGTCACCCGC
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MAPPYRVAVVVGSLRKQAYSLRTAQALSKLAPDTLKLDIVTLHGLSMYNQDLETDAPPADWTAFRDSIKASDAVLFVTPE YNRSIPGVLKNAIDVGSRPYGKSCFDKKPAGVLSNSPGAIGGFGANHHLRQCLVFLNMPTLQQPEAYVGGIGDAFGEDGA LVKDSLREFLQKYIDAFAGFVAQQYK
Sequences:
>Translated_186_residues MAPPYRVAVVVGSLRKQAYSLRTAQALSKLAPDTLKLDIVTLHGLSMYNQDLETDAPPADWTAFRDSIKASDAVLFVTPE YNRSIPGVLKNAIDVGSRPYGKSCFDKKPAGVLSNSPGAIGGFGANHHLRQCLVFLNMPTLQQPEAYVGGIGDAFGEDGA LVKDSLREFLQKYIDAFAGFVAQQYK >Mature_185_residues APPYRVAVVVGSLRKQAYSLRTAQALSKLAPDTLKLDIVTLHGLSMYNQDLETDAPPADWTAFRDSIKASDAVLFVTPEY NRSIPGVLKNAIDVGSRPYGKSCFDKKPAGVLSNSPGAIGGFGANHHLRQCLVFLNMPTLQQPEAYVGGIGDAFGEDGAL VKDSLREFLQKYIDAFAGFVAQQYK
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=185, Percent_Identity=32.972972972973, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20138; Mature: 20007
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPPYRVAVVVGSLRKQAYSLRTAQALSKLAPDTLKLDIVTLHGLSMYNQDLETDAPPAD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHCCCCCCCCCCCH WTAFRDSIKASDAVLFVTPEYNRSIPGVLKNAIDVGSRPYGKSCFDKKPAGVLSNSPGAI HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GGFGANHHLRQCLVFLNMPTLQQPEAYVGGIGDAFGEDGALVKDSLREFLQKYIDAFAGF CCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHH VAQQYK HHHCCC >Mature Secondary Structure APPYRVAVVVGSLRKQAYSLRTAQALSKLAPDTLKLDIVTLHGLSMYNQDLETDAPPAD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHCCCCCCCCCCCH WTAFRDSIKASDAVLFVTPEYNRSIPGVLKNAIDVGSRPYGKSCFDKKPAGVLSNSPGAI HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC GGFGANHHLRQCLVFLNMPTLQQPEAYVGGIGDAFGEDGALVKDSLREFLQKYIDAFAGF CCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHH VAQQYK HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]