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The map label for this gene is secF [H]

Identifier: 192291545

GI number: 192291545

Start: 3415764

End: 3416882

Strand: Reverse

Name: secF [H]

Synonym: Rpal_3171

Alternate gene names: 192291545

Gene position: 3416882-3415764 (Counterclockwise)

Preceding gene: 192291546

Following gene: 192291544

Centisome position: 59.49

GC content: 64.08

Gene sequence:

>1119_bases
GTGACACACTGGATTTTGGTCGGGCTGGGCGTTCTGATCGTGGTGCTGACGGTCGTCAGCATCTTCGGCTGGCTGCCGTC
GCTGCGCATCGTTCCCGATAACACTCACTTCGATTTCACCCGCTTCCGCCGCATCAGCTTCCCGATCTCGGCGGTGCTGT
CGATCGCCGCCATCACGCTGTTCTTCACCCACGGGCTGAATTTCGGCATCGACTTCCGCGGCGGCACGTTGCTCGAAGTT
CGCGCCCATTCCGGCGCGGCCGATATCGCCGGCATGCGCGAGACGCTGAGCAAGCTCAGTCTCGGTGACGTGCAGTTGCA
GCAGTTCGGCGGTCCGGCCGAAGTGCTGATCCGTATCGCCGAGCAGCCCGGCGGCGACCAGGCGCAGCAGGTGGCAGTTC
AGAAGGTGCGCGCCGCGCTCGGCGACTCGGTCGACTATCGCCGCGTCGAAGTGGTCGGCCCGCGCGTCTCCAGCGAGCTG
CTCGCGTTCGGCATGCTCGGCCTGATGGTCGCGATCCTGGGCATTCTGGTCTATCTCTGGTTCCGCTTCGAATGGCAGTT
CGCGCTCGGCGCGATGATCGCCAACGTCCACGACATCGTGCTGACGATCGGCTTCATGTCGATCAGTCAGGTCGATTTCG
ACCTGACCTCGATCGCGGCGCTGCTGACCATTCTCGGCTACTCGCTCAACGACACCGTCGTGATCTACGACCGTATCCGC
GAGATGCTGCGGCGCTACAAGAAGATGCCGATGCCGCAGCTCCTGAACGAGTCGATCAACTCGACGCTGTCGCGCTCGAT
CATCACCCACGTCACGGTGACGCTGGCGCTGCTCGCGCTGCTGTTGTTCGGCGGCCATGCGATCCACTCGTTCACCGCGG
TGATGATGTTCGGCGTGGTGCTGGTCGGCACCTACACATCGATCTTCATTGCGGCGCCGATCCTGATCTATCTTGGTGTC
GGCACCCATCGGCTCGATGAGCCGGCAGAGAAGCCGGCCAAGCCCGAGCCGGTGGCGCCGCTCGCTGCTGCCGAAGAGAT
CCCGGCCCAGTTCGTCGAGCCTGAACCGGCCGCGCCGGCATCCAAGCCGGCGAAGGCCGGCAAGCCGAAGAAGCGATAA

Upstream 100 bases:

>100_bases
ACCGCCTTCACTTTGACCCGACTGATCGTCGCGACCTGGGTGCGCTGGAAGCGGCCGCACCACGTGCCGATCTGACGCAT
CGAATCCGAGAGAGCCACAC

Downstream 100 bases:

>100_bases
TGACCTTAGCCGGGCAGGCCGCCGTTCAAGGTGGCCGGCCCTGGCGGGGTGAACCGTTGCAGTGCCACCATATTGACGCG
CAGGCGCCGGTCGTTGCGAT

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTHWILVGLGVLIVVLTVVSIFGWLPSLRIVPDNTHFDFTRFRRISFPISAVLSIAAITLFFTHGLNFGIDFRGGTLLEV
RAHSGAADIAGMRETLSKLSLGDVQLQQFGGPAEVLIRIAEQPGGDQAQQVAVQKVRAALGDSVDYRRVEVVGPRVSSEL
LAFGMLGLMVAILGILVYLWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDRIR
EMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALLLFGGHAIHSFTAVMMFGVVLVGTYTSIFIAAPILIYLGV
GTHRLDEPAEKPAKPEPVAPLAAAEEIPAQFVEPEPAAPASKPAKAGKPKKR

Sequences:

>Translated_372_residues
MTHWILVGLGVLIVVLTVVSIFGWLPSLRIVPDNTHFDFTRFRRISFPISAVLSIAAITLFFTHGLNFGIDFRGGTLLEV
RAHSGAADIAGMRETLSKLSLGDVQLQQFGGPAEVLIRIAEQPGGDQAQQVAVQKVRAALGDSVDYRRVEVVGPRVSSEL
LAFGMLGLMVAILGILVYLWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDRIR
EMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALLLFGGHAIHSFTAVMMFGVVLVGTYTSIFIAAPILIYLGV
GTHRLDEPAEKPAKPEPVAPLAAAEEIPAQFVEPEPAAPASKPAKAGKPKKR
>Mature_371_residues
THWILVGLGVLIVVLTVVSIFGWLPSLRIVPDNTHFDFTRFRRISFPISAVLSIAAITLFFTHGLNFGIDFRGGTLLEVR
AHSGAADIAGMRETLSKLSLGDVQLQQFGGPAEVLIRIAEQPGGDQAQQVAVQKVRAALGDSVDYRRVEVVGPRVSSELL
AFGMLGLMVAILGILVYLWFRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDRIRE
MLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALLLFGGHAIHSFTAVMMFGVVLVGTYTSIFIAAPILIYLGVG
THRLDEPAEKPAKPEPVAPLAAAEEIPAQFVEPEPAAPASKPAKAGKPKKR

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=305, Percent_Identity=38.0327868852459, Blast_Score=212, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 40525; Mature: 40394

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHWILVGLGVLIVVLTVVSIFGWLPSLRIVPDNTHFDFTRFRRISFPISAVLSIAAITL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHH
FFTHGLNFGIDFRGGTLLEVRAHSGAADIAGMRETLSKLSLGDVQLQQFGGPAEVLIRIA
HHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHH
EQPGGDQAQQVAVQKVRAALGDSVDYRRVEVVGPRVSSELLAFGMLGLMVAILGILVYLW
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
FRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDRIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEHHHHH
EMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALLLFGGHAIHSFTAVMMFGVV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LVGTYTSIFIAAPILIYLGVGTHRLDEPAEKPAKPEPVAPLAAAEEIPAQFVEPEPAAPA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCC
SKPAKAGKPKKR
CCCCCCCCCCCC
>Mature Secondary Structure 
THWILVGLGVLIVVLTVVSIFGWLPSLRIVPDNTHFDFTRFRRISFPISAVLSIAAITL
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHH
FFTHGLNFGIDFRGGTLLEVRAHSGAADIAGMRETLSKLSLGDVQLQQFGGPAEVLIRIA
HHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHH
EQPGGDQAQQVAVQKVRAALGDSVDYRRVEVVGPRVSSELLAFGMLGLMVAILGILVYLW
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
FRFEWQFALGAMIANVHDIVLTIGFMSISQVDFDLTSIAALLTILGYSLNDTVVIYDRIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEHHHHH
EMLRRYKKMPMPQLLNESINSTLSRSIITHVTVTLALLALLLFGGHAIHSFTAVMMFGVV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LVGTYTSIFIAAPILIYLGVGTHRLDEPAEKPAKPEPVAPLAAAEEIPAQFVEPEPAAPA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCC
SKPAKAGKPKKR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA