Click here to switch to the map view.

The map label for this gene is 192291544

Identifier: 192291544

GI number: 192291544

Start: 3415220

End: 3415603

Strand: Reverse

Name: 192291544

Synonym: Rpal_3170

Alternate gene names: NA

Gene position: 3415603-3415220 (Counterclockwise)

Preceding gene: 192291545

Following gene: 192291543

Centisome position: 59.46

GC content: 63.28

Gene sequence:

>384_bases
GTGGCGCAGCGCTCAGAGATTCCTCATTTTCCGCGAACGGCCGCGATCGATGCCTATGGCAAAGGCGGATTCTACTTCGC
TGACATGTCGCATCAGGGATCGCTGCTGTTCCTGCCGGATGCGGTGTGGGGCTGGGACGTGACCAAACCGGAGCAGATCG
ACCGCTATAGCCTGCAGCGGGTGTTCGATAACGCCAACGCGATCGACACGCTGATCGTCGGCACCGGCGCCGACGTCTGG
ATCGCGCCGCGGCAGCTGCGTGAGGCACTGCGCGGCGTCAATGTCGTACTCGACACCATGCAGACCGGTCCTGCGATCCG
GACCTACAACATCATGATCGGCGAGCGGCGGCGCGTTGCGGCAGCGCTAATTGCGGTGCCATGA

Upstream 100 bases:

>100_bases
AGTGCCACCATATTGACGCGCAGGCGCCGGTCGTTGCGATCGGCGCAAATCTGTGGGGGGCCGCCGCATGACGCCAACGC
TCGACGAGGGACGCTAGCTC

Downstream 100 bases:

>100_bases
GCGAGTCCGCCGCTAGCACCAGCGCTGCCGCGTTCTGCGCCGGCTTGGTGCGCGAGGCCGACTTCGACCGTTACGCGGCG
ACGCTGTTCGTCCCGCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF124 [H]

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MAQRSEIPHFPRTAAIDAYGKGGFYFADMSHQGSLLFLPDAVWGWDVTKPEQIDRYSLQRVFDNANAIDTLIVGTGADVW
IAPRQLREALRGVNVVLDTMQTGPAIRTYNIMIGERRRVAAALIAVP

Sequences:

>Translated_127_residues
MAQRSEIPHFPRTAAIDAYGKGGFYFADMSHQGSLLFLPDAVWGWDVTKPEQIDRYSLQRVFDNANAIDTLIVGTGADVW
IAPRQLREALRGVNVVLDTMQTGPAIRTYNIMIGERRRVAAALIAVP
>Mature_126_residues
AQRSEIPHFPRTAAIDAYGKGGFYFADMSHQGSLLFLPDAVWGWDVTKPEQIDRYSLQRVFDNANAIDTLIVGTGADVWI
APRQLREALRGVNVVLDTMQTGPAIRTYNIMIGERRRVAAALIAVP

Specific function: Not required for the biogenesis of c-type cytochromes [H]

COG id: COG3737

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007523 [H]

Pfam domain/function: PF04430 DUF498 [H]

EC number: NA

Molecular weight: Translated: 14101; Mature: 13970

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRSEIPHFPRTAAIDAYGKGGFYFADMSHQGSLLFLPDAVWGWDVTKPEQIDRYSLQR
CCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHH
VFDNANAIDTLIVGTGADVWIAPRQLREALRGVNVVLDTMQTGPAIRTYNIMIGERRRVA
HHCCCCCEEEEEEECCCCEEECHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCEEE
AALIAVP
EEEEECC
>Mature Secondary Structure 
AQRSEIPHFPRTAAIDAYGKGGFYFADMSHQGSLLFLPDAVWGWDVTKPEQIDRYSLQR
CCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHH
VFDNANAIDTLIVGTGADVWIAPRQLREALRGVNVVLDTMQTGPAIRTYNIMIGERRRVA
HHCCCCCEEEEEEECCCCEEECHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCEEE
AALIAVP
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1310666 [H]