| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291402
Identifier: 192291402
GI number: 192291402
Start: 3288516
End: 3288761
Strand: Reverse
Name: 192291402
Synonym: Rpal_3026
Alternate gene names: NA
Gene position: 3288761-3288516 (Counterclockwise)
Preceding gene: 192291403
Following gene: 192291401
Centisome position: 57.26
GC content: 60.16
Gene sequence:
>246_bases ATGAAACGAGGCATGACCAAAGAAGAAGCCGCGGCCTATTGCGGGTGTGAGACGTTGGCGGCGTTCGATCAGTGGCGCAA GAAGGGCATCGTTCCAGACGCGATCCCCGGCACGAACCGGTGGGACCGCAAGGCGATCGACCAAGCCCTAGACCGCGCGT CTGGCCTTGTGACAGGATCGGGCGAGCTATCGCCCTATCAGCGATGGAAGACCGAGAATGCCGCGAATAAAACGCAAGCC GCTTAA
Upstream 100 bases:
>100_bases ACGATGTGGCGTGGTTCGACACGATCACCACCCTGCACGACTTCTGCGATTGCATGATCAATCCCGCGCCATGGGCGGCG ACAGAACCAGAGGCGGCCAG
Downstream 100 bases:
>100_bases GCTCAAAGGCATCAAGCGGGTTGCAATGAAGCTCGCTGATGGTTCGGTTCGCGTGTATTTGTACCACCGAGCCACCGGCG AGCCGCTGGACGAAAGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MKRGMTKEEAAAYCGCETLAAFDQWRKKGIVPDAIPGTNRWDRKAIDQALDRASGLVTGSGELSPYQRWKTENAANKTQA A
Sequences:
>Translated_81_residues MKRGMTKEEAAAYCGCETLAAFDQWRKKGIVPDAIPGTNRWDRKAIDQALDRASGLVTGSGELSPYQRWKTENAANKTQA A >Mature_81_residues MKRGMTKEEAAAYCGCETLAAFDQWRKKGIVPDAIPGTNRWDRKAIDQALDRASGLVTGSGELSPYQRWKTENAANKTQA A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8902; Mature: 8902
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRGMTKEEAAAYCGCETLAAFDQWRKKGIVPDAIPGTNRWDRKAIDQALDRASGLVTGS CCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC GELSPYQRWKTENAANKTQAA CCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKRGMTKEEAAAYCGCETLAAFDQWRKKGIVPDAIPGTNRWDRKAIDQALDRASGLVTGS CCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC GELSPYQRWKTENAANKTQAA CCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA