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The map label for this gene is 192291401

Identifier: 192291401

GI number: 192291401

Start: 3287489

End: 3288544

Strand: Reverse

Name: 192291401

Synonym: Rpal_3025

Alternate gene names: NA

Gene position: 3288544-3287489 (Counterclockwise)

Preceding gene: 192291402

Following gene: 192291400

Centisome position: 57.25

GC content: 63.54

Gene sequence:

>1056_bases
ATGCCGCGAATAAAACGCAAGCCGCTTAAGCTCAAAGGCATCAAGCGGGTTGCAATGAAGCTCGCTGATGGTTCGGTTCG
CGTGTATTTGTACCACCGAGCCACCGGCGAGCCGCTGGACGAAAGCCGGCTGGTCGAGAGCTACGCAGAGGCCGAAAAGA
AGAAGCGGCGTCGCGGCGGCAAGACGCTAACTGACCTGATCAGGTTTTTCGACACGTCCGAGACGTTCGCCTCATTGAGC
GCCGAGCACCGGAAGCAATACGTCTGGAAGTTCGCGCGGATCGAAAAGAAGTGGGGCACCGTCCCCGAAGACACCTTCAA
CAATCAGGACGACGCCGACGCCTTCGCCGCCGACGCACTCGCGTGGCACCAGGAGATCGGCAAGACCTCGCGCCGATCGG
CTGACAACCTCATGTCGGCGCTATGCCGCGCTCTCAGCTTCGCGAAGGAAAAGCGGCGCATCAAATTTCACCCGATCCCG
AGTTTCGAGCGGCTGTACAAGAGCGAGCGGGCCGACAAGGTATGGCCGCCCGAGCTGCAGCAGAAGTTCATCAGCACCGC
CCGGCCGGCGATGCAAACCGCGATGATTCTGGTCCGGAACACCGCCATGCGCGCGATCGACATTCGCGGATTCGCCTGGA
CCCGCTACGACGGCCAGCGCGTGCAGATCCGGTCACACAAGACGGGCAAATGGCTTTGGATACCGGCCACCCGAGAGCTG
CGCGCGCACCTGGACTGCCTAAAGCGGACGGGAGCCCTGGTGCTGCTCACACCCAGCGGCAAAGCCTACACCCGCCGGTA
CTTCAACGAGCACTTCCGCGAGGATGCCGACGCGATCGGCGCCGGCGATCTGAATTTCCACGACAACCGCGGCACGGCAG
CAACGCTGTTGGCCGAGGCCGGCGCCACGGCGCCAGAGATCGCCGAGGCGCTGACCTGGACCGTGGACAAGGCGCAGCGC
ATCATAGACGCCTATTTGGCCCGCCGCGGCGTGCTGGCGGCGAACGCCATCGCGAAGCTGGAAGACTACCGGGACCGTCA
GGGGAAGCAGCCATGA

Upstream 100 bases:

>100_bases
CGGTGGGACCGCAAGGCGATCGACCAAGCCCTAGACCGCGCGTCTGGCCTTGTGACAGGATCGGGCGAGCTATCGCCCTA
TCAGCGATGGAAGACCGAGA

Downstream 100 bases:

>100_bases
GTCGTACGCTCACCGAAGAATTAGCTTTGGAGCAGGAGCTACTACGCCGCCGGGTGATCCATGCGACGCGCCCGCGCGGC
GCTATGAACCTCTCGGAGGA

Product: integrase family protein

Products: NA

Alternate protein names: Phage-Related Integrase; Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Phage Integrase Family Protein; Site-Specific Integrase/Recombinase

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MPRIKRKPLKLKGIKRVAMKLADGSVRVYLYHRATGEPLDESRLVESYAEAEKKKRRRGGKTLTDLIRFFDTSETFASLS
AEHRKQYVWKFARIEKKWGTVPEDTFNNQDDADAFAADALAWHQEIGKTSRRSADNLMSALCRALSFAKEKRRIKFHPIP
SFERLYKSERADKVWPPELQQKFISTARPAMQTAMILVRNTAMRAIDIRGFAWTRYDGQRVQIRSHKTGKWLWIPATREL
RAHLDCLKRTGALVLLTPSGKAYTRRYFNEHFREDADAIGAGDLNFHDNRGTAATLLAEAGATAPEIAEALTWTVDKAQR
IIDAYLARRGVLAANAIAKLEDYRDRQGKQP

Sequences:

>Translated_351_residues
MPRIKRKPLKLKGIKRVAMKLADGSVRVYLYHRATGEPLDESRLVESYAEAEKKKRRRGGKTLTDLIRFFDTSETFASLS
AEHRKQYVWKFARIEKKWGTVPEDTFNNQDDADAFAADALAWHQEIGKTSRRSADNLMSALCRALSFAKEKRRIKFHPIP
SFERLYKSERADKVWPPELQQKFISTARPAMQTAMILVRNTAMRAIDIRGFAWTRYDGQRVQIRSHKTGKWLWIPATREL
RAHLDCLKRTGALVLLTPSGKAYTRRYFNEHFREDADAIGAGDLNFHDNRGTAATLLAEAGATAPEIAEALTWTVDKAQR
IIDAYLARRGVLAANAIAKLEDYRDRQGKQP
>Mature_350_residues
PRIKRKPLKLKGIKRVAMKLADGSVRVYLYHRATGEPLDESRLVESYAEAEKKKRRRGGKTLTDLIRFFDTSETFASLSA
EHRKQYVWKFARIEKKWGTVPEDTFNNQDDADAFAADALAWHQEIGKTSRRSADNLMSALCRALSFAKEKRRIKFHPIPS
FERLYKSERADKVWPPELQQKFISTARPAMQTAMILVRNTAMRAIDIRGFAWTRYDGQRVQIRSHKTGKWLWIPATRELR
AHLDCLKRTGALVLLTPSGKAYTRRYFNEHFREDADAIGAGDLNFHDNRGTAATLLAEAGATAPEIAEALTWTVDKAQRI
IDAYLARRGVLAANAIAKLEDYRDRQGKQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40162; Mature: 40031

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRIKRKPLKLKGIKRVAMKLADGSVRVYLYHRATGEPLDESRLVESYAEAEKKKRRRGG
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
KTLTDLIRFFDTSETFASLSAEHRKQYVWKFARIEKKWGTVPEDTFNNQDDADAFAADAL
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
AWHQEIGKTSRRSADNLMSALCRALSFAKEKRRIKFHPIPSFERLYKSERADKVWPPELQ
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCCCCCCHHHH
QKFISTARPAMQTAMILVRNTAMRAIDIRGFAWTRYDGQRVQIRSHKTGKWLWIPATREL
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCEEEEEECCCCCEEEECCHHHH
RAHLDCLKRTGALVLLTPSGKAYTRRYFNEHFREDADAIGAGDLNFHDNRGTAATLLAEA
HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHC
GATAPEIAEALTWTVDKAQRIIDAYLARRGVLAANAIAKLEDYRDRQGKQP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PRIKRKPLKLKGIKRVAMKLADGSVRVYLYHRATGEPLDESRLVESYAEAEKKKRRRGG
CCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
KTLTDLIRFFDTSETFASLSAEHRKQYVWKFARIEKKWGTVPEDTFNNQDDADAFAADAL
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
AWHQEIGKTSRRSADNLMSALCRALSFAKEKRRIKFHPIPSFERLYKSERADKVWPPELQ
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCCCCCCHHHH
QKFISTARPAMQTAMILVRNTAMRAIDIRGFAWTRYDGQRVQIRSHKTGKWLWIPATREL
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCEEEEEECCCCCEEEECCHHHH
RAHLDCLKRTGALVLLTPSGKAYTRRYFNEHFREDADAIGAGDLNFHDNRGTAATLLAEA
HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHC
GATAPEIAEALTWTVDKAQRIIDAYLARRGVLAANAIAKLEDYRDRQGKQP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA