| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291403
Identifier: 192291403
GI number: 192291403
Start: 3288758
End: 3289210
Strand: Reverse
Name: 192291403
Synonym: Rpal_3027
Alternate gene names: NA
Gene position: 3289210-3288758 (Counterclockwise)
Preceding gene: 192291404
Following gene: 192291402
Centisome position: 57.26
GC content: 60.26
Gene sequence:
>453_bases ATGGGTGGATCTCAGCAACGGCGCCAACCGGTCGCCGATCGTATCGAGGTCGATCCGATCGCGTGGATCTGTTGGGATCT GGCATTCGGTAACGGCGTCCACCAGATCACAAACGATGCGGCGCTCGCAGCGTCCAGAATGACGCGGCGAAATTATTGGC TCGTCGAACCGCTGTACTCGCAATGCCCGCCGTCGCCGGCAGGAACGGTTTCAGTTGATCTTTTGAACAACGAGCGCGCC GTAACCGACATGCTTCGCGGCGAGAACAACAAGCTCCGCGCCGACATCGAACGGCTCACGCAGGGATACCGCGACATCAA GACGGCGACCATTGAGGGTCGCGTTTGCGACGATGTGGCGTGGTTCGACACGATCACCACCCTGCACGACTTCTGCGATT GCATGATCAATCCCGCGCCATGGGCGGCGACAGAACCAGAGGCGGCCAGATGA
Upstream 100 bases:
>100_bases CTCAGCAAGCCGCGCCAGAAGATCAAAAGCCGCGGCTTCGAGCCGGCCGCCCCGCAGCGCAGGGCAACGGCAGAAATCAG CAAATGGAGGGGATTCTAAG
Downstream 100 bases:
>100_bases AACGAGGCATGACCAAAGAAGAAGCCGCGGCCTATTGCGGGTGTGAGACGTTGGCGGCGTTCGATCAGTGGCGCAAGAAG GGCATCGTTCCAGACGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MGGSQQRRQPVADRIEVDPIAWICWDLAFGNGVHQITNDAALAASRMTRRNYWLVEPLYSQCPPSPAGTVSVDLLNNERA VTDMLRGENNKLRADIERLTQGYRDIKTATIEGRVCDDVAWFDTITTLHDFCDCMINPAPWAATEPEAAR
Sequences:
>Translated_150_residues MGGSQQRRQPVADRIEVDPIAWICWDLAFGNGVHQITNDAALAASRMTRRNYWLVEPLYSQCPPSPAGTVSVDLLNNERA VTDMLRGENNKLRADIERLTQGYRDIKTATIEGRVCDDVAWFDTITTLHDFCDCMINPAPWAATEPEAAR >Mature_149_residues GGSQQRRQPVADRIEVDPIAWICWDLAFGNGVHQITNDAALAASRMTRRNYWLVEPLYSQCPPSPAGTVSVDLLNNERAV TDMLRGENNKLRADIERLTQGYRDIKTATIEGRVCDDVAWFDTITTLHDFCDCMINPAPWAATEPEAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16821; Mature: 16690
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGSQQRRQPVADRIEVDPIAWICWDLAFGNGVHQITNDAALAASRMTRRNYWLVEPLYS CCCCHHHCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCHHH QCPPSPAGTVSVDLLNNERAVTDMLRGENNKLRADIERLTQGYRDIKTATIEGRVCDDVA HCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHH WFDTITTLHDFCDCMINPAPWAATEPEAAR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure GGSQQRRQPVADRIEVDPIAWICWDLAFGNGVHQITNDAALAASRMTRRNYWLVEPLYS CCCHHHCCCHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCHHH QCPPSPAGTVSVDLLNNERAVTDMLRGENNKLRADIERLTQGYRDIKTATIEGRVCDDVA HCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHH WFDTITTLHDFCDCMINPAPWAATEPEAAR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA