Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192291378

Identifier: 192291378

GI number: 192291378

Start: 3269581

End: 3269862

Strand: Reverse

Name: 192291378

Synonym: Rpal_3002

Alternate gene names: NA

Gene position: 3269862-3269581 (Counterclockwise)

Preceding gene: 192291379

Following gene: 192291374

Centisome position: 56.93

GC content: 59.93

Gene sequence:

>282_bases
ATGATCCGGTTCGCACCGGAAGCCGTCGACGATTTAGCGCGGGTGCGTGACTTTCTCGATGTGAACAGCCCTGACGCTGC
CAAGCGTGCTATCTCCACGCTCTTTGCTGCCCTTCAGCGCCTCGAAGACTTTCCGAATCTCGGTCGTCCGACCGGCGACG
ACAGTATTCGTCAAAGAGTCGTTCCGTTCGGATCGGCCTGTTACGTCATGCGCTACGTTTTGGGCGACAACGGCGATCTT
CTCGTCCTGCGGGTTTGGCACGGTCGCGAGGCGCGGACGTGA

Upstream 100 bases:

>100_bases
GGAAAACCGGCGAAGCGGTGCCGATTGCCGAAGTCCGGGCCTGGGTCGAAAGCTGGGGCACCGATAGCGAGTTGCCACAA
CCATCGGCGCGACTGGTGGG

Downstream 100 bases:

>100_bases
GCCGTGGCGTTAGTGTGACGCAGAGTTGATCGTGGCATCGCTGGCTCGGCTTACTGACAAACAAACCGGCATGACCTGTC
CAACTCCCCTGTCCCTTGCG

Product: plasmid stabilization system protein

Products: NA

Alternate protein names: Plasmid Stabilization System Protein

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MIRFAPEAVDDLARVRDFLDVNSPDAAKRAISTLFAALQRLEDFPNLGRPTGDDSIRQRVVPFGSACYVMRYVLGDNGDL
LVLRVWHGREART

Sequences:

>Translated_93_residues
MIRFAPEAVDDLARVRDFLDVNSPDAAKRAISTLFAALQRLEDFPNLGRPTGDDSIRQRVVPFGSACYVMRYVLGDNGDL
LVLRVWHGREART
>Mature_93_residues
MIRFAPEAVDDLARVRDFLDVNSPDAAKRAISTLFAALQRLEDFPNLGRPTGDDSIRQRVVPFGSACYVMRYVLGDNGDL
LVLRVWHGREART

Specific function: Unknown

COG id: COG3668

COG function: function code R; Plasmid stabilization system protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10462; Mature: 10462

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFAPEAVDDLARVRDFLDVNSPDAAKRAISTLFAALQRLEDFPNLGRPTGDDSIRQRV
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
VPFGSACYVMRYVLGDNGDLLVLRVWHGREART
CCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MIRFAPEAVDDLARVRDFLDVNSPDAAKRAISTLFAALQRLEDFPNLGRPTGDDSIRQRV
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
VPFGSACYVMRYVLGDNGDLLVLRVWHGREART
CCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA