| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291379
Identifier: 192291379
GI number: 192291379
Start: 3269859
End: 3270146
Strand: Reverse
Name: 192291379
Synonym: Rpal_3003
Alternate gene names: NA
Gene position: 3270146-3269859 (Counterclockwise)
Preceding gene: 192291392
Following gene: 192291378
Centisome position: 56.93
GC content: 62.5
Gene sequence:
>288_bases ATGAACCTGATCCGCCGCACCTTCGATCTCGACTTGGCGACCGACGAGCGCTTGAGGGCGCTTGCGGCCGAGCGTGGTCA AGACGAAGCAGCGGTGCTCGCCAAAGCACTCGCGCTGCTCGACTCAGTGGGCGAGATCGAAATTCCCGATGTTGCTGAAG ATCGTCGGCGTCTTGACCGGTTTCGGAAAACCGGCGAAGCGGTGCCGATTGCCGAAGTCCGGGCCTGGGTCGAAAGCTGG GGCACCGATAGCGAGTTGCCACAACCATCGGCGCGACTGGTGGGATGA
Upstream 100 bases:
>100_bases CGGAGGGAGCCGTGGCCGTCGACGAGCCAGGTCTCATGTCAGGTCAGGCCTGCCCTGCCCTGCCCTCGACAGCGCCACCC ATCGGACTTAGCTTTTTGCC
Downstream 100 bases:
>100_bases TCCGGTTCGCACCGGAAGCCGTCGACGATTTAGCGCGGGTGCGTGACTTTCTCGATGTGAACAGCCCTGACGCTGCCAAG CGTGCTATCTCCACGCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MNLIRRTFDLDLATDERLRALAAERGQDEAAVLAKALALLDSVGEIEIPDVAEDRRRLDRFRKTGEAVPIAEVRAWVESW GTDSELPQPSARLVG
Sequences:
>Translated_95_residues MNLIRRTFDLDLATDERLRALAAERGQDEAAVLAKALALLDSVGEIEIPDVAEDRRRLDRFRKTGEAVPIAEVRAWVESW GTDSELPQPSARLVG >Mature_95_residues MNLIRRTFDLDLATDERLRALAAERGQDEAAVLAKALALLDSVGEIEIPDVAEDRRRLDRFRKTGEAVPIAEVRAWVESW GTDSELPQPSARLVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10570; Mature: 10570
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIRRTFDLDLATDERLRALAAERGQDEAAVLAKALALLDSVGEIEIPDVAEDRRRLDR CCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH FRKTGEAVPIAEVRAWVESWGTDSELPQPSARLVG HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLIRRTFDLDLATDERLRALAAERGQDEAAVLAKALALLDSVGEIEIPDVAEDRRRLDR CCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH FRKTGEAVPIAEVRAWVESWGTDSELPQPSARLVG HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA