Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192291379

Identifier: 192291379

GI number: 192291379

Start: 3269859

End: 3270146

Strand: Reverse

Name: 192291379

Synonym: Rpal_3003

Alternate gene names: NA

Gene position: 3270146-3269859 (Counterclockwise)

Preceding gene: 192291392

Following gene: 192291378

Centisome position: 56.93

GC content: 62.5

Gene sequence:

>288_bases
ATGAACCTGATCCGCCGCACCTTCGATCTCGACTTGGCGACCGACGAGCGCTTGAGGGCGCTTGCGGCCGAGCGTGGTCA
AGACGAAGCAGCGGTGCTCGCCAAAGCACTCGCGCTGCTCGACTCAGTGGGCGAGATCGAAATTCCCGATGTTGCTGAAG
ATCGTCGGCGTCTTGACCGGTTTCGGAAAACCGGCGAAGCGGTGCCGATTGCCGAAGTCCGGGCCTGGGTCGAAAGCTGG
GGCACCGATAGCGAGTTGCCACAACCATCGGCGCGACTGGTGGGATGA

Upstream 100 bases:

>100_bases
CGGAGGGAGCCGTGGCCGTCGACGAGCCAGGTCTCATGTCAGGTCAGGCCTGCCCTGCCCTGCCCTCGACAGCGCCACCC
ATCGGACTTAGCTTTTTGCC

Downstream 100 bases:

>100_bases
TCCGGTTCGCACCGGAAGCCGTCGACGATTTAGCGCGGGTGCGTGACTTTCTCGATGTGAACAGCCCTGACGCTGCCAAG
CGTGCTATCTCCACGCTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MNLIRRTFDLDLATDERLRALAAERGQDEAAVLAKALALLDSVGEIEIPDVAEDRRRLDRFRKTGEAVPIAEVRAWVESW
GTDSELPQPSARLVG

Sequences:

>Translated_95_residues
MNLIRRTFDLDLATDERLRALAAERGQDEAAVLAKALALLDSVGEIEIPDVAEDRRRLDRFRKTGEAVPIAEVRAWVESW
GTDSELPQPSARLVG
>Mature_95_residues
MNLIRRTFDLDLATDERLRALAAERGQDEAAVLAKALALLDSVGEIEIPDVAEDRRRLDRFRKTGEAVPIAEVRAWVESW
GTDSELPQPSARLVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10570; Mature: 10570

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIRRTFDLDLATDERLRALAAERGQDEAAVLAKALALLDSVGEIEIPDVAEDRRRLDR
CCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
FRKTGEAVPIAEVRAWVESWGTDSELPQPSARLVG
HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLIRRTFDLDLATDERLRALAAERGQDEAAVLAKALALLDSVGEIEIPDVAEDRRRLDR
CCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
FRKTGEAVPIAEVRAWVESWGTDSELPQPSARLVG
HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA