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The map label for this gene is ybgK [H]

Identifier: 192291335

GI number: 192291335

Start: 3230013

End: 3231023

Strand: Reverse

Name: ybgK [H]

Synonym: Rpal_2957

Alternate gene names: 192291335

Gene position: 3231023-3230013 (Counterclockwise)

Preceding gene: 192291336

Following gene: 192291334

Centisome position: 56.25

GC content: 68.05

Gene sequence:

>1011_bases
ATGACGAAGCTTGTAATCGACGCCGTCGGACCGGCCACCTCCGTGCAGGACGCCGGGCGCCACGGCGCACAGCGTTACGG
CCTCCCGCCGAGCGGCGCGATGGACCGGCTGTCACTTGCCGCCGCCAATGTGCTGGTCGGCAACAGCGCGTTCGCGGCGG
CGATAGAACTCGGTCCGCTCGGCGCGAAACTGAGTGTACGCGACGGCGCGGTGCGGCTGGCGCTGACAGGCGCCGAACGG
CCCGCTGCGCTGGATGGGCAGCCGCTCGCGTTCAACGAGTCTTTCACGCTCGCTGAAGGCCAAATCCTCACCCTCGGCGT
CGCGCGCGGCGGCGTATTCAGCTATCTGGGAATTGAAGGCGGCGTCGGCGGCGAGCCGATGTTCGGCAGTCTTGCGGTCA
ACGCGCGCGCCGGTCTCGGCAGTCCCTACCCGCGGCCGCTGCAGGCCGGCGATGCGATCGCCGTCAAGTCTGCAGCGCCG
TCGGTCGAACGACGCCTCGATCTGCCTGAGCAACAGGATACGCCGATCCGCGTCGTGCTTGGTCCGCAGGACGATGAGTT
CGGTGCCGCGGTCGAAGCCTTTCTGGCCGGTGAATGGACGATCTCGGCGACCAGCGACCGCATGGGCTATCGTCTCGACG
GCCCGCAGATCTCGCATCTCCACGGCCACAACATCGTCTCGGACGGCACCGTCGACGGCAGCATTCAGGTGCCGGGGTCG
GGCCAGCCGATCGTGTTGATGCCGGATCGCGGCACCAGCGGCGGCTATCCGAAGATCGCCACGGTGATCTCAGCCGATCT
CGGCCGACTGGCGCAGCGTCAACCCGGCCGGCCGTTCCGCTTTCAGGCGGTGAGCGTCGAAGAGGCTCAGGACGCTTATC
GCACGATGGCCAAGCTGATCCGCTCGCTGCCTGACCTGCTGCGCGATGCGCAGCACGCGATCATCGACCTCGACGCGCTG
CTCTCCGCCAACGTTGCCGGCACGGCAATCGACGCGCTGGCGGCGGAGTAA

Upstream 100 bases:

>100_bases
CCGGCGACGCAATCAGCTTCGCGCAGATCGATGCCAAGGAATTCGCCGAACGAGACGATGCAGCGTCTCATGGTGAAGTC
GTCGCGGAACTGCTGAGCGC

Downstream 100 bases:

>100_bases
TCGAATCCGACGACGGAACCAACCGACATGAAGATCGATCTGAACTGCGACCTGGGCGAAGGCTTTGGTGTCTGGCAGAT
GGGTGACGATGCGGCAATGA

Product: urea amidolyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTKLVIDAVGPATSVQDAGRHGAQRYGLPPSGAMDRLSLAAANVLVGNSAFAAAIELGPLGAKLSVRDGAVRLALTGAER
PAALDGQPLAFNESFTLAEGQILTLGVARGGVFSYLGIEGGVGGEPMFGSLAVNARAGLGSPYPRPLQAGDAIAVKSAAP
SVERRLDLPEQQDTPIRVVLGPQDDEFGAAVEAFLAGEWTISATSDRMGYRLDGPQISHLHGHNIVSDGTVDGSIQVPGS
GQPIVLMPDRGTSGGYPKIATVISADLGRLAQRQPGRPFRFQAVSVEEAQDAYRTMAKLIRSLPDLLRDAQHAIIDLDAL
LSANVAGTAIDALAAE

Sequences:

>Translated_336_residues
MTKLVIDAVGPATSVQDAGRHGAQRYGLPPSGAMDRLSLAAANVLVGNSAFAAAIELGPLGAKLSVRDGAVRLALTGAER
PAALDGQPLAFNESFTLAEGQILTLGVARGGVFSYLGIEGGVGGEPMFGSLAVNARAGLGSPYPRPLQAGDAIAVKSAAP
SVERRLDLPEQQDTPIRVVLGPQDDEFGAAVEAFLAGEWTISATSDRMGYRLDGPQISHLHGHNIVSDGTVDGSIQVPGS
GQPIVLMPDRGTSGGYPKIATVISADLGRLAQRQPGRPFRFQAVSVEEAQDAYRTMAKLIRSLPDLLRDAQHAIIDLDAL
LSANVAGTAIDALAAE
>Mature_335_residues
TKLVIDAVGPATSVQDAGRHGAQRYGLPPSGAMDRLSLAAANVLVGNSAFAAAIELGPLGAKLSVRDGAVRLALTGAERP
AALDGQPLAFNESFTLAEGQILTLGVARGGVFSYLGIEGGVGGEPMFGSLAVNARAGLGSPYPRPLQAGDAIAVKSAAPS
VERRLDLPEQQDTPIRVVLGPQDDEFGAAVEAFLAGEWTISATSDRMGYRLDGPQISHLHGHNIVSDGTVDGSIQVPGSG
QPIVLMPDRGTSGGYPKIATVISADLGRLAQRQPGRPFRFQAVSVEEAQDAYRTMAKLIRSLPDLLRDAQHAIIDLDALL
SANVAGTAIDALAAE

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=310, Percent_Identity=39.0322580645161, Blast_Score=174, Evalue=6e-45,
Organism=Saccharomyces cerevisiae, GI6319685, Length=326, Percent_Identity=28.8343558282209, Blast_Score=108, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 34712; Mature: 34581

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLVIDAVGPATSVQDAGRHGAQRYGLPPSGAMDRLSLAAANVLVGNSAFAAAIELGPL
CCEEEEECCCCCCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHHEEECCCCEEEEEEECCC
GAKLSVRDGAVRLALTGAERPAALDGQPLAFNESFTLAEGQILTLGVARGGVFSYLGIEG
CCEEEECCCEEEEEEECCCCCCCCCCCCEEECCCEEEECCEEEEEEEECCCEEEEEECCC
GVGGEPMFGSLAVNARAGLGSPYPRPLQAGDAIAVKSAAPSVERRLDLPEQQDTPIRVVL
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCEEEEE
GPQDDEFGAAVEAFLAGEWTISATSDRMGYRLDGPQISHLHGHNIVSDGTVDGSIQVPGS
CCCCCHHHHHHHHHHCCCEEEEECCCCCCEEECCCCEEEECCCCEECCCCCCCEEECCCC
GQPIVLMPDRGTSGGYPKIATVISADLGRLAQRQPGRPFRFQAVSVEEAQDAYRTMAKLI
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHH
RSLPDLLRDAQHAIIDLDALLSANVAGTAIDALAAE
HHHHHHHHHHHHHHEEHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure 
TKLVIDAVGPATSVQDAGRHGAQRYGLPPSGAMDRLSLAAANVLVGNSAFAAAIELGPL
CEEEEECCCCCCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHHEEECCCCEEEEEEECCC
GAKLSVRDGAVRLALTGAERPAALDGQPLAFNESFTLAEGQILTLGVARGGVFSYLGIEG
CCEEEECCCEEEEEEECCCCCCCCCCCCEEECCCEEEECCEEEEEEEECCCEEEEEECCC
GVGGEPMFGSLAVNARAGLGSPYPRPLQAGDAIAVKSAAPSVERRLDLPEQQDTPIRVVL
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCEEEEE
GPQDDEFGAAVEAFLAGEWTISATSDRMGYRLDGPQISHLHGHNIVSDGTVDGSIQVPGS
CCCCCHHHHHHHHHHCCCEEEEECCCCCCEEECCCCEEEECCCCEECCCCCCCEEECCCC
GQPIVLMPDRGTSGGYPKIATVISADLGRLAQRQPGRPFRFQAVSVEEAQDAYRTMAKLI
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHH
RSLPDLLRDAQHAIIDLDALLSANVAGTAIDALAAE
HHHHHHHHHHHHHHEEHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]