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The map label for this gene is ybgL [C]

Identifier: 192291334

GI number: 192291334

Start: 3229221

End: 3229985

Strand: Reverse

Name: ybgL [C]

Synonym: Rpal_2956

Alternate gene names: 192291334

Gene position: 3229985-3229221 (Counterclockwise)

Preceding gene: 192291335

Following gene: 192291329

Centisome position: 56.23

GC content: 65.36

Gene sequence:

>765_bases
ATGAAGATCGATCTGAACTGCGACCTGGGCGAAGGCTTTGGTGTCTGGCAGATGGGTGACGATGCGGCAATGATGCAGAT
CGCCACCAGCGTCAACATCGCCTGCGGCTTCCATGCCGGCGATCCGGACATCATGCATGCGACCGTCAAGCTGGCGAAGC
AGAACGGCGTCGCGATCGGTGCGCATCCGGGCTTCCGCGACCTGCACGGCTTTGGCCGTCGTCCGGTGCCGGGGATCACT
TCAGCCGAGATCGAAAACCTCGTCGCCTATCAGATCGGCGCGCTGCAGGCGGTCGCGGCCCTTGCCGGCCACAAGGTCAC
CCACGTCAAGGCACACGGCGCGCTGTCCAACGTCGCCTGCGAAGACGACATGACCGCACGTGCGATCGCCTCGGCGATCA
AGGCGGTCGATCCATCGCTGGTGTTCGTCGTGCTGGCGAACTCCAAGCTGATGCTGGCGGGCGAAGCCGCCGGCCTGCCG
CTCGCGCACGAGGTGTTTGCCGATCGCGCCTATGAGGACGACGGCAATCTGGTATCGCGCAAGAAGCCCGGCGCGGTGCT
GCACGACCCCAATGAAATTGCCGAACGCGTGTTGCGGATGGCGCAGGACGGCGCCGTCGTCTCGGTGACCGGCAAGGTGA
TCAAGATGCGCACCGACACGGTGTGCATCCACGGCGACACCAAAGGCGCGGTCGAGATCGCGCGCGGCGTCCGCCGCAAG
CTGGAAGCCAGCGGCATCACCGTCGCGCCTTTTGCTGGGACCTGA

Upstream 100 bases:

>100_bases
GATCATCGACCTCGACGCGCTGCTCTCCGCCAACGTTGCCGGCACGGCAATCGACGCGCTGGCGGCGGAGTAATCGAATC
CGACGACGGAACCAACCGAC

Downstream 100 bases:

>100_bases
CGCCTGCGGCCGGGCGCTACGCCCCGGCCAGCGCCAACAGCTCCGCGGTCAGCGCGCCGTCCGCGCTCCATTCATCAAGA
ATGGAGAAGTGGTGATGCCG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKIDLNCDLGEGFGVWQMGDDAAMMQIATSVNIACGFHAGDPDIMHATVKLAKQNGVAIGAHPGFRDLHGFGRRPVPGIT
SAEIENLVAYQIGALQAVAALAGHKVTHVKAHGALSNVACEDDMTARAIASAIKAVDPSLVFVVLANSKLMLAGEAAGLP
LAHEVFADRAYEDDGNLVSRKKPGAVLHDPNEIAERVLRMAQDGAVVSVTGKVIKMRTDTVCIHGDTKGAVEIARGVRRK
LEASGITVAPFAGT

Sequences:

>Translated_254_residues
MKIDLNCDLGEGFGVWQMGDDAAMMQIATSVNIACGFHAGDPDIMHATVKLAKQNGVAIGAHPGFRDLHGFGRRPVPGIT
SAEIENLVAYQIGALQAVAALAGHKVTHVKAHGALSNVACEDDMTARAIASAIKAVDPSLVFVVLANSKLMLAGEAAGLP
LAHEVFADRAYEDDGNLVSRKKPGAVLHDPNEIAERVLRMAQDGAVVSVTGKVIKMRTDTVCIHGDTKGAVEIARGVRRK
LEASGITVAPFAGT
>Mature_254_residues
MKIDLNCDLGEGFGVWQMGDDAAMMQIATSVNIACGFHAGDPDIMHATVKLAKQNGVAIGAHPGFRDLHGFGRRPVPGIT
SAEIENLVAYQIGALQAVAALAGHKVTHVKAHGALSNVACEDDMTARAIASAIKAVDPSLVFVVLANSKLMLAGEAAGLP
LAHEVFADRAYEDDGNLVSRKKPGAVLHDPNEIAERVLRMAQDGAVVSVTGKVIKMRTDTVCIHGDTKGAVEIARGVRRK
LEASGITVAPFAGT

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=249, Percent_Identity=45.3815261044177, Blast_Score=201, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26533; Mature: 26533

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDLNCDLGEGFGVWQMGDDAAMMQIATSVNIACGFHAGDPDIMHATVKLAKQNGVAIG
CEEEEECCCCCCCCEEEECCCHHHHHHHHEEEEEEEECCCCHHHHHHHHEEHHCCCEEEE
AHPGFRDLHGFGRRPVPGITSAEIENLVAYQIGALQAVAALAGHKVTHVKAHGALSNVAC
CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
EDDMTARAIASAIKAVDPSLVFVVLANSKLMLAGEAAGLPLAHEVFADRAYEDDGNLVSR
CCCHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHCCCCCCCCCEECC
KKPGAVLHDPNEIAERVLRMAQDGAVVSVTGKVIKMRTDTVCIHGDTKGAVEIARGVRRK
CCCCCEEECHHHHHHHHHHHHCCCCEEEEECEEEEEEECEEEEECCCCCHHHHHHHHHHH
LEASGITVAPFAGT
HHHCCEEEECCCCC
>Mature Secondary Structure
MKIDLNCDLGEGFGVWQMGDDAAMMQIATSVNIACGFHAGDPDIMHATVKLAKQNGVAIG
CEEEEECCCCCCCCEEEECCCHHHHHHHHEEEEEEEECCCCHHHHHHHHEEHHCCCEEEE
AHPGFRDLHGFGRRPVPGITSAEIENLVAYQIGALQAVAALAGHKVTHVKAHGALSNVAC
CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
EDDMTARAIASAIKAVDPSLVFVVLANSKLMLAGEAAGLPLAHEVFADRAYEDDGNLVSR
CCCHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHCCCCCCCCCEECC
KKPGAVLHDPNEIAERVLRMAQDGAVVSVTGKVIKMRTDTVCIHGDTKGAVEIARGVRRK
CCCCCEEECHHHHHHHHHHHHCCCCEEEEECEEEEEEECEEEEECCCCCHHHHHHHHHHH
LEASGITVAPFAGT
HHHCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA