| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is aat [H]
Identifier: 192291086
GI number: 192291086
Start: 2939092
End: 2939769
Strand: Reverse
Name: aat [H]
Synonym: Rpal_2707
Alternate gene names: 192291086
Gene position: 2939769-2939092 (Counterclockwise)
Preceding gene: 192291087
Following gene: 192291085
Centisome position: 51.18
GC content: 67.7
Gene sequence:
>678_bases ATGGCCTCACGAGACTCCTCCGCCGCTTCCGAGATCACGCCCGACGTGCTGCTGCGCGCCTATGCGTGCGGCATCTTCCC GATGGCCGAGAGCGTCGACGATCCCTCGCTGTTCTGGGTCGAGCCCGACATGCGCGGCATCATTCCGCTCGGCGGCTTCC GCGTGTCCTCGCGCCTCGCCCGCACCGTGCGGTCCGACGCGTTCACCGTCACCGTCAATCGCGACTTCAAGGCAGTGATC GACGGCTGCGCCGCGCCGCAGCCGGGGCGCGACGACACCTGGATCAACCGCAGGATTCGCGAGCTGTATATCGGCCTGCA CGACATCGGCCATTGCCACAGCGTGGAGGTCTGGCAGGACGGCGATCTCGCCGGCGGCCTCTACGGCGTTAGCCTCGGCC GGGCGTTCTTCGGCGAGAGCATGTTTCACCGCGCCCGCGATGCTTCGAAGGTGGCGCTGGTCCACTTGGTCGCGCGCCTG CTCGCCGGCGGCTACACCCTGCTCGACACCCAGTTCGTGACCGATCACTTGAAGAGCTTCGGCGCCATCGAAGTGCCGCG GCTGCGCTATCGCTCGCTGCTCGACGACTCGCTCGAAGGCGAAGCCTCGTTCGCAGCACTGCCGCTCGACCGCCCGGTCA CCGGCACCGAAGCGTTGGCGATCATCACCCGGACGTAA
Upstream 100 bases:
>100_bases TGCTGCTGCTGGTCGGCTGGCATCCCGATCTGCCACGCTGAGCCGCGACCGCCATCGCCCACAGGGTCGCGCCCTTTCGC CGTCGTGCTATGCTTTGCGG
Downstream 100 bases:
>100_bases CGCATCCTGGTACCCACAGCAAACTGTTCAAGACGCGCACACGCGCCGCTCGCATGACGGTCATTGCTTGACCGTTGCAA CCCCGTTTTCTACTAATCGA
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MASRDSSAASEITPDVLLRAYACGIFPMAESVDDPSLFWVEPDMRGIIPLGGFRVSSRLARTVRSDAFTVTVNRDFKAVI DGCAAPQPGRDDTWINRRIRELYIGLHDIGHCHSVEVWQDGDLAGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARL LAGGYTLLDTQFVTDHLKSFGAIEVPRLRYRSLLDDSLEGEASFAALPLDRPVTGTEALAIITRT
Sequences:
>Translated_225_residues MASRDSSAASEITPDVLLRAYACGIFPMAESVDDPSLFWVEPDMRGIIPLGGFRVSSRLARTVRSDAFTVTVNRDFKAVI DGCAAPQPGRDDTWINRRIRELYIGLHDIGHCHSVEVWQDGDLAGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARL LAGGYTLLDTQFVTDHLKSFGAIEVPRLRYRSLLDDSLEGEASFAALPLDRPVTGTEALAIITRT >Mature_224_residues ASRDSSAASEITPDVLLRAYACGIFPMAESVDDPSLFWVEPDMRGIIPLGGFRVSSRLARTVRSDAFTVTVNRDFKAVID GCAAPQPGRDDTWINRRIRELYIGLHDIGHCHSVEVWQDGDLAGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARLL AGGYTLLDTQFVTDHLKSFGAIEVPRLRYRSLLDDSLEGEASFAALPLDRPVTGTEALAIITRT
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=186, Percent_Identity=40.8602150537634, Blast_Score=143, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 24637; Mature: 24506
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRDSSAASEITPDVLLRAYACGIFPMAESVDDPSLFWVEPDMRGIIPLGGFRVSSRLA CCCCCCCCHHHCCHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCCCEEECCCCHHHHHHH RTVRSDAFTVTVNRDFKAVIDGCAAPQPGRDDTWINRRIRELYIGLHDIGHCHSVEVWQD HHHHCCEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC GDLAGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARLLAGGYTLLDTQFVTDHLKSF CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHC GAIEVPRLRYRSLLDDSLEGEASFAALPLDRPVTGTEALAIITRT CCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEEECC >Mature Secondary Structure ASRDSSAASEITPDVLLRAYACGIFPMAESVDDPSLFWVEPDMRGIIPLGGFRVSSRLA CCCCCCCHHHCCHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCCCEEECCCCHHHHHHH RTVRSDAFTVTVNRDFKAVIDGCAAPQPGRDDTWINRRIRELYIGLHDIGHCHSVEVWQD HHHHCCEEEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC GDLAGGLYGVSLGRAFFGESMFHRARDASKVALVHLVARLLAGGYTLLDTQFVTDHLKSF CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHC GAIEVPRLRYRSLLDDSLEGEASFAALPLDRPVTGTEALAIITRT CCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA