Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192291087

Identifier: 192291087

GI number: 192291087

Start: 2939829

End: 2941046

Strand: Reverse

Name: 192291087

Synonym: Rpal_2708

Alternate gene names: NA

Gene position: 2941046-2939829 (Counterclockwise)

Preceding gene: 192291088

Following gene: 192291086

Centisome position: 51.2

GC content: 66.67

Gene sequence:

>1218_bases
GTGACCCCGATCCTGATCTTCGGCATCCCGCTCGATTTCATCCTGTTTGCCGCCACCCTGGTCGGGGTCGCGATCTTCCA
TCGCCACACCTTGCTGATCGCGCTGGCCGGCCTGGTAACCGTGGTCGGCTACAAGCTGGCGTTCGCCGGCTTCAAGACCG
GCGTCGGCCTGTCCGGCTTGGCGCTGCACATGCAGCACGAATGGGTCACGCTGGCGAACCTGTTCCTGCTGCTGATGGGC
TTCGCGCTGCTGTCGGCGCATTTCGAAAAGAGCGGCATTCCCGACGAGATGCCGGCACTGCTCCCGGACGACTGGAAAGG
CCCGGTGGTGCTGCTCGGGCTGGTGTTCGTGCTGTCGAGCTTCCTCGACAACATCGCCGCCGCGCTGATCGGCGGCATGG
TGGCGCGGCACGTGTTCCGCGGCCGGGTCCACATCGGTTACCTCGCCGCGATCGTCGCCGCCTCGAACGCAGGCGGCTCC
GGCAGCGTGGTCGGCGACACCACCACGACGATGATGTGGATCGCAGGGGTCTCGCCGCTCAGCGTGCTGGAAGCTTACGT
GGCGGCGGTGATCGCGCTGGCGCTGTTCGCCGTGCCGGCCTCGATCCAGCAGCAGAAGTTTTCGCCGATCGTGAAGAACG
CGCCAAAAGGCCTGCAGATCGAGTGGGTCCGGGTCGGCATCGTCGCGGCGATCCTGATCGCGGCACTGGCGGCCAACGTC
ACCGCGAACATGAAATTCCCGGCGCTGCTCGACCACGCGCCGGTGCTCGGCCTGACGGTCTGGGCGGTGATCCTGATCAC
CGCGCCGCTGCGCCGGCCGGATTGGGAGCTGATGCCCGCGACCTTCAAGGGCACGATCTTCCTGCTCGCGCTGGTGACGG
CGGCCTCGCTGATGCCGGTCGAAGAATTGCCCGCCGCGAGTTGGCAGACTGCGCTCGGCCTCGGCTTCGTCTCGGCCGGC
TTCGACAACATCCCGCTCACCGCGCTGGCGCTGAAACAGGGCGGCTACGATTGGGGCTTTCTGGCCTACGCGGTCGGCTT
CGGCGGCTCGATGATGTGGTTCGGCTCCTCGGCCGGCGTCGCGATCACCAACATGTTCCCAGAGGGCAAGTCCGTGGTGA
TGTGGCTGCGCCACGGCTGGCACGTCGGCGTCGCCTATTTCATCGCGTTCTTTGCGATGCTGCTGCTGGTCGGCTGGCAT
CCCGATCTGCCACGCTGA

Upstream 100 bases:

>100_bases
CGCCTTTGAACGTTCACGCCCTCAGCGGCAATATGTTGCCGTTCGTATCTCGGTGGCGCGCCTCTGCGGCGCAGCCCGTC
CTGTCCGGCGCGAGGCAGCC

Downstream 100 bases:

>100_bases
GCCGCGACCGCCATCGCCCACAGGGTCGCGCCCTTTCGCCGTCGTGCTATGCTTTGCGGATGGCCTCACGAGACTCCTCC
GCCGCTTCCGAGATCACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTPILIFGIPLDFILFAATLVGVAIFHRHTLLIALAGLVTVVGYKLAFAGFKTGVGLSGLALHMQHEWVTLANLFLLLMG
FALLSAHFEKSGIPDEMPALLPDDWKGPVVLLGLVFVLSSFLDNIAAALIGGMVARHVFRGRVHIGYLAAIVAASNAGGS
GSVVGDTTTTMMWIAGVSPLSVLEAYVAAVIALALFAVPASIQQQKFSPIVKNAPKGLQIEWVRVGIVAAILIAALAANV
TANMKFPALLDHAPVLGLTVWAVILITAPLRRPDWELMPATFKGTIFLLALVTAASLMPVEELPAASWQTALGLGFVSAG
FDNIPLTALALKQGGYDWGFLAYAVGFGGSMMWFGSSAGVAITNMFPEGKSVVMWLRHGWHVGVAYFIAFFAMLLLVGWH
PDLPR

Sequences:

>Translated_405_residues
MTPILIFGIPLDFILFAATLVGVAIFHRHTLLIALAGLVTVVGYKLAFAGFKTGVGLSGLALHMQHEWVTLANLFLLLMG
FALLSAHFEKSGIPDEMPALLPDDWKGPVVLLGLVFVLSSFLDNIAAALIGGMVARHVFRGRVHIGYLAAIVAASNAGGS
GSVVGDTTTTMMWIAGVSPLSVLEAYVAAVIALALFAVPASIQQQKFSPIVKNAPKGLQIEWVRVGIVAAILIAALAANV
TANMKFPALLDHAPVLGLTVWAVILITAPLRRPDWELMPATFKGTIFLLALVTAASLMPVEELPAASWQTALGLGFVSAG
FDNIPLTALALKQGGYDWGFLAYAVGFGGSMMWFGSSAGVAITNMFPEGKSVVMWLRHGWHVGVAYFIAFFAMLLLVGWH
PDLPR
>Mature_404_residues
TPILIFGIPLDFILFAATLVGVAIFHRHTLLIALAGLVTVVGYKLAFAGFKTGVGLSGLALHMQHEWVTLANLFLLLMGF
ALLSAHFEKSGIPDEMPALLPDDWKGPVVLLGLVFVLSSFLDNIAAALIGGMVARHVFRGRVHIGYLAAIVAASNAGGSG
SVVGDTTTTMMWIAGVSPLSVLEAYVAAVIALALFAVPASIQQQKFSPIVKNAPKGLQIEWVRVGIVAAILIAALAANVT
ANMKFPALLDHAPVLGLTVWAVILITAPLRRPDWELMPATFKGTIFLLALVTAASLMPVEELPAASWQTALGLGFVSAGF
DNIPLTALALKQGGYDWGFLAYAVGFGGSMMWFGSSAGVAITNMFPEGKSVVMWLRHGWHVGVAYFIAFFAMLLLVGWHP
DLPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42966; Mature: 42834

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPILIFGIPLDFILFAATLVGVAIFHRHTLLIALAGLVTVVGYKLAFAGFKTGVGLSGL
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
ALHMQHEWVTLANLFLLLMGFALLSAHFEKSGIPDEMPALLPDDWKGPVVLLGLVFVLSS
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FLDNIAAALIGGMVARHVFRGRVHIGYLAAIVAASNAGGSGSVVGDTTTTMMWIAGVSPL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHCCCHH
SVLEAYVAAVIALALFAVPASIQQQKFSPIVKNAPKGLQIEWVRVGIVAAILIAALAANV
HHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCC
TANMKFPALLDHAPVLGLTVWAVILITAPLRRPDWELMPATFKGTIFLLALVTAASLMPV
CCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH
EELPAASWQTALGLGFVSAGFDNIPLTALALKQGGYDWGFLAYAVGFGGSMMWFGSSAGV
HHCCCCHHHHHHHHHHHHCCCCCCCHHHEEHHCCCCCHHHHHHHHHCCCCEEEECCCCCE
AITNMFPEGKSVVMWLRHGWHVGVAYFIAFFAMLLLVGWHPDLPR
EEEECCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TPILIFGIPLDFILFAATLVGVAIFHRHTLLIALAGLVTVVGYKLAFAGFKTGVGLSGL
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
ALHMQHEWVTLANLFLLLMGFALLSAHFEKSGIPDEMPALLPDDWKGPVVLLGLVFVLSS
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FLDNIAAALIGGMVARHVFRGRVHIGYLAAIVAASNAGGSGSVVGDTTTTMMWIAGVSPL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHCCCHH
SVLEAYVAAVIALALFAVPASIQQQKFSPIVKNAPKGLQIEWVRVGIVAAILIAALAANV
HHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCC
TANMKFPALLDHAPVLGLTVWAVILITAPLRRPDWELMPATFKGTIFLLALVTAASLMPV
CCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH
EELPAASWQTALGLGFVSAGFDNIPLTALALKQGGYDWGFLAYAVGFGGSMMWFGSSAGV
HHCCCCHHHHHHHHHHHHCCCCCCCHHHEEHHCCCCCHHHHHHHHHCCCCEEEECCCCCE
AITNMFPEGKSVVMWLRHGWHVGVAYFIAFFAMLLLVGWHPDLPR
EEEECCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA