| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192291085
Identifier: 192291085
GI number: 192291085
Start: 2938648
End: 2938968
Strand: Reverse
Name: 192291085
Synonym: Rpal_2706
Alternate gene names: NA
Gene position: 2938968-2938648 (Counterclockwise)
Preceding gene: 192291086
Following gene: 192291084
Centisome position: 51.17
GC content: 64.17
Gene sequence:
>321_bases ATGCTGAAAAGAACATTGGACCAAACGTCATTACGTGTCTCGCCAGCTCTGCTGGCTGCAGCTGTTGCGATCGCTGTGAT CTCTTTTCCAACCCGCTCCGTCGCGCGCGATGGCGCTGCCGTGTTCGGCGCGCTCGCTGGCGTCGCCGCCGCAGCGATCA TCGCCAACGGCATCGCGCAGCAACAACAGCCGCGCGTCTATCGGTCTGCGCGTCACCGGCGGCACGTTGCGCACCGATCG CGTCCGGCGCCGTCACAGGCATCGATGGCAGACCCGTTCGCCGGCGTTGCCGTTTCGAAAACACGTCCGGCCAGAGACTA A
Upstream 100 bases:
>100_bases CTGTTCAAGACGCGCACACGCGCCGCTCGCATGACGGTCATTGCTTGACCGTTGCAACCCCGTTTTCTACTAATCGAAGG CAGGGCATCTGGGGACTGTC
Downstream 100 bases:
>100_bases GCGTCCACCGCCGGACAAAGGCACCTCCACCAGAGGCGCAGCCATTTTCCAGTGCGAAGGCCGATGAAGCACACAACATT CGCAGTGCGGCTCGTGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MLKRTLDQTSLRVSPALLAAAVAIAVISFPTRSVARDGAAVFGALAGVAAAAIIANGIAQQQQPRVYRSARHRRHVAHRS RPAPSQASMADPFAGVAVSKTRPARD
Sequences:
>Translated_106_residues MLKRTLDQTSLRVSPALLAAAVAIAVISFPTRSVARDGAAVFGALAGVAAAAIIANGIAQQQQPRVYRSARHRRHVAHRS RPAPSQASMADPFAGVAVSKTRPARD >Mature_106_residues MLKRTLDQTSLRVSPALLAAAVAIAVISFPTRSVARDGAAVFGALAGVAAAAIIANGIAQQQQPRVYRSARHRRHVAHRS RPAPSQASMADPFAGVAVSKTRPARD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11093; Mature: 11093
Theoretical pI: Translated: 12.57; Mature: 12.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRTLDQTSLRVSPALLAAAVAIAVISFPTRSVARDGAAVFGALAGVAAAAIIANGIAQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQPRVYRSARHRRHVAHRSRPAPSQASMADPFAGVAVSKTRPARD CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLKRTLDQTSLRVSPALLAAAVAIAVISFPTRSVARDGAAVFGALAGVAAAAIIANGIAQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQPRVYRSARHRRHVAHRSRPAPSQASMADPFAGVAVSKTRPARD CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA