Click here to switch to the map view.

The map label for this gene is 192290874

Identifier: 192290874

GI number: 192290874

Start: 2687340

End: 2687915

Strand: Reverse

Name: 192290874

Synonym: Rpal_2490

Alternate gene names: NA

Gene position: 2687915-2687340 (Counterclockwise)

Preceding gene: 192290877

Following gene: 192290872

Centisome position: 46.79

GC content: 68.75

Gene sequence:

>576_bases
ATGTCGTTTGCCGCTTTCGCCTCCGCCGTTTTGGCGCTGCTGCTGGCCCCGGGGCCGACCAACACCCTGATCGGCGTCGC
CGGCGCGCAGGGCGGGCTCGGCCGCGTCGCGCGGCTGCTGCCGGCCGAACTGATCGGCTATCTGACAGCGATCCTGCCCC
TCGCCTATCTGGGCGCCGACCTGATGGCAGAGCTTCCGGCCGCCGCCCTGGTCGTGAAGGTCGCTGCGGCCGCCTGGGTG
ATGCTGCTGGCGGTGCGGCTCTGGCACCTGAACCCATCCGGTGCGACCGGGGCAATTACGGCGCGGCGGGTTTATCTGAC
GACGTTGCTGAACCCGAAGGCGCTGATTTTCGCTCTGGTGCTGCTGCCCGCACCGAGCGAACCCGATTTCCCCACTAAGC
TGACGATGTTCTGTCTGATGGTCGGCGTGGTGGCGCTGCTGTGGGGCTTCGCCGGAACCATGACGCAGATCGGCGCCGGC
GGCGACCGCCGCCTACAGATGACGCAGCGGATTGCCTCGCTGTGGCTGGCGCTGGTGTCGCTGTCGCTGATCGCCGGCGC
GCTCACCACCGTCTGA

Upstream 100 bases:

>100_bases
TTGCCAGGATGCCGCGCCGGACCAAGCGTTGCGGCATGATCAAGATCAAGACATCGATGGCCGCAAGGAATACCTCCGGG
AGGTTCAACAGGCTGGGATC

Downstream 100 bases:

>100_bases
GCCGCCAGCGGCGTCTTCGACCAGAGCTAAACCGGCCCGAGCAAGCCGTCTTCGCGCATCATTTCGACCAGCATGCCCTC
GCGCAGACCGCGATCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSFAAFASAVLALLLAPGPTNTLIGVAGAQGGLGRVARLLPAELIGYLTAILPLAYLGADLMAELPAAALVVKVAAAAWV
MLLAVRLWHLNPSGATGAITARRVYLTTLLNPKALIFALVLLPAPSEPDFPTKLTMFCLMVGVVALLWGFAGTMTQIGAG
GDRRLQMTQRIASLWLALVSLSLIAGALTTV

Sequences:

>Translated_191_residues
MSFAAFASAVLALLLAPGPTNTLIGVAGAQGGLGRVARLLPAELIGYLTAILPLAYLGADLMAELPAAALVVKVAAAAWV
MLLAVRLWHLNPSGATGAITARRVYLTTLLNPKALIFALVLLPAPSEPDFPTKLTMFCLMVGVVALLWGFAGTMTQIGAG
GDRRLQMTQRIASLWLALVSLSLIAGALTTV
>Mature_190_residues
SFAAFASAVLALLLAPGPTNTLIGVAGAQGGLGRVARLLPAELIGYLTAILPLAYLGADLMAELPAAALVVKVAAAAWVM
LLAVRLWHLNPSGATGAITARRVYLTTLLNPKALIFALVLLPAPSEPDFPTKLTMFCLMVGVVALLWGFAGTMTQIGAGG
DRRLQMTQRIASLWLALVSLSLIAGALTTV

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19759; Mature: 19628

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAAFASAVLALLLAPGPTNTLIGVAGAQGGLGRVARLLPAELIGYLTAILPLAYLGAD
CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMAELPAAALVVKVAAAAWVMLLAVRLWHLNPSGATGAITARRVYLTTLLNPKALIFALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
LLPAPSEPDFPTKLTMFCLMVGVVALLWGFAGTMTQIGAGGDRRLQMTQRIASLWLALVS
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LSLIAGALTTV
HHHHHHHHHCC
>Mature Secondary Structure 
SFAAFASAVLALLLAPGPTNTLIGVAGAQGGLGRVARLLPAELIGYLTAILPLAYLGAD
CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMAELPAAALVVKVAAAAWVMLLAVRLWHLNPSGATGAITARRVYLTTLLNPKALIFALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHH
LLPAPSEPDFPTKLTMFCLMVGVVALLWGFAGTMTQIGAGGDRRLQMTQRIASLWLALVS
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LSLIAGALTTV
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA