Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192290854

Identifier: 192290854

GI number: 192290854

Start: 2665504

End: 2666448

Strand: Reverse

Name: 192290854

Synonym: Rpal_2470

Alternate gene names: NA

Gene position: 2666448-2665504 (Counterclockwise)

Preceding gene: 192290855

Following gene: 192290853

Centisome position: 46.42

GC content: 63.17

Gene sequence:

>945_bases
ATGCTGTCCCGTACCGCTGAAAACCTGTTCTGGCTGTCCCGTTACGTCGAGCGCGCCGAATATCTGGCGCGGACCATCGA
GGCGACGCTGCGCGTCACCGCGCTGCCGAACACCTATTCGGGCCAGGGCAATGAATGGGATTCGGCGCTGCTCACCGCCG
GCGTCAGCGCCAGCTTCTATGCGCAGTATGACGAGGCCAACGAGCCCAACGTCGTCGAATTCCTGTCGATGTCGACCTCG
AACCCGTCGTCGATCCGCAACTGCATCGAGGCGGCGCGACTGAACGCACGCTCAGTTCGCACCGCCCTGACGGGCGCGAT
GTGGGACACCATCAACTCGGCCTGGATCGAACTGCAGGAAAACTGGAGCAAGGGCGCCAAGACCCGGGAGCAGCTGACGC
AATTCCTGCGCTTCGTGCAGGAGACGTCGCTGCGGTTCGACGGCTCTGCCTATCGCACCATGCTGCGAAACGACGCCTAT
TGGTTCTCGCGGCTCGGCGTGCATCTGGAGCGCGCCGACAACACCGCGCGGATTCTCGACGTCAAATATCACCTGCTGCT
GCCCGAAGAGGAGCACGTCGGCGGCCCGCTCGACTACTATCAGTGGTCGTCGATCCTGCGCTCGGTGTCGGCCCTGACCG
CCTATCACTGGGTGTATCGCGAGACGCTGAAGCCATGGCTGATCGCCGACCTGCTGATCCTCAACGACAGCCTGCCGCGG
TCGCTGGCCTCGTGCTACGGCAATCTGGTGCGCAACCTCGACCAGATCGGCGTCGACTATGGCCGCCAGGGCCCGGCCCA
ACGCCACGCCCGCGCCATCCGCAACCGGCTGGAACACTCCAACATGGACGACATCTTCCAGCGCGGCGTTCACGAATTCG
TTCAGGAATTCATCGCGGACAACAGTCGGCTCGGCGAAATCGTCGCCAAGCAGTATCTTATCTGA

Upstream 100 bases:

>100_bases
CGGGGCTGGGCCCGGAATCCATCCTCCCGGCAGGAGTTATGGATTCCGCGCTCGCTTGCGCTCGCGCCCCGGAATGACGC
TGTCCTCGGAATGAACCGCC

Downstream 100 bases:

>100_bases
TCGAGCACAGGCGCGCCCTGCCCGCCGCCGCAACCGGACTCTGGACGCCATGCGCCTGCGCATCACGCACACCACCAACT
ATCGATACGAGCCGCCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLSRTAENLFWLSRYVERAEYLARTIEATLRVTALPNTYSGQGNEWDSALLTAGVSASFYAQYDEANEPNVVEFLSMSTS
NPSSIRNCIEAARLNARSVRTALTGAMWDTINSAWIELQENWSKGAKTREQLTQFLRFVQETSLRFDGSAYRTMLRNDAY
WFSRLGVHLERADNTARILDVKYHLLLPEEEHVGGPLDYYQWSSILRSVSALTAYHWVYRETLKPWLIADLLILNDSLPR
SLASCYGNLVRNLDQIGVDYGRQGPAQRHARAIRNRLEHSNMDDIFQRGVHEFVQEFIADNSRLGEIVAKQYLI

Sequences:

>Translated_314_residues
MLSRTAENLFWLSRYVERAEYLARTIEATLRVTALPNTYSGQGNEWDSALLTAGVSASFYAQYDEANEPNVVEFLSMSTS
NPSSIRNCIEAARLNARSVRTALTGAMWDTINSAWIELQENWSKGAKTREQLTQFLRFVQETSLRFDGSAYRTMLRNDAY
WFSRLGVHLERADNTARILDVKYHLLLPEEEHVGGPLDYYQWSSILRSVSALTAYHWVYRETLKPWLIADLLILNDSLPR
SLASCYGNLVRNLDQIGVDYGRQGPAQRHARAIRNRLEHSNMDDIFQRGVHEFVQEFIADNSRLGEIVAKQYLI
>Mature_314_residues
MLSRTAENLFWLSRYVERAEYLARTIEATLRVTALPNTYSGQGNEWDSALLTAGVSASFYAQYDEANEPNVVEFLSMSTS
NPSSIRNCIEAARLNARSVRTALTGAMWDTINSAWIELQENWSKGAKTREQLTQFLRFVQETSLRFDGSAYRTMLRNDAY
WFSRLGVHLERADNTARILDVKYHLLLPEEEHVGGPLDYYQWSSILRSVSALTAYHWVYRETLKPWLIADLLILNDSLPR
SLASCYGNLVRNLDQIGVDYGRQGPAQRHARAIRNRLEHSNMDDIFQRGVHEFVQEFIADNSRLGEIVAKQYLI

Specific function: Unknown

COG id: COG2307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36054; Mature: 36054

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRTAENLFWLSRYVERAEYLARTIEATLRVTALPNTYSGQGNEWDSALLTAGVSASFY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCCHHHH
AQYDEANEPNVVEFLSMSTSNPSSIRNCIEAARLNARSVRTALTGAMWDTINSAWIELQE
HHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NWSKGAKTREQLTQFLRFVQETSLRFDGSAYRTMLRNDAYWFSRLGVHLERADNTARILD
HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
VKYHLLLPEEEHVGGPLDYYQWSSILRSVSALTAYHWVYRETLKPWLIADLLILNDSLPR
EEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH
SLASCYGNLVRNLDQIGVDYGRQGPAQRHARAIRNRLEHSNMDDIFQRGVHEFVQEFIAD
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
NSRLGEIVAKQYLI
CHHHHHHHHHHHCC
>Mature Secondary Structure
MLSRTAENLFWLSRYVERAEYLARTIEATLRVTALPNTYSGQGNEWDSALLTAGVSASFY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCCHHHH
AQYDEANEPNVVEFLSMSTSNPSSIRNCIEAARLNARSVRTALTGAMWDTINSAWIELQE
HHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NWSKGAKTREQLTQFLRFVQETSLRFDGSAYRTMLRNDAYWFSRLGVHLERADNTARILD
HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
VKYHLLLPEEEHVGGPLDYYQWSSILRSVSALTAYHWVYRETLKPWLIADLLILNDSLPR
EEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH
SLASCYGNLVRNLDQIGVDYGRQGPAQRHARAIRNRLEHSNMDDIFQRGVHEFVQEFIAD
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
NSRLGEIVAKQYLI
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA