Click here to switch to the map view.

The map label for this gene is 192290855

Identifier: 192290855

GI number: 192290855

Start: 2666595

End: 2668013

Strand: Reverse

Name: 192290855

Synonym: Rpal_2471

Alternate gene names: NA

Gene position: 2668013-2666595 (Counterclockwise)

Preceding gene: 192290859

Following gene: 192290854

Centisome position: 46.45

GC content: 64.9

Gene sequence:

>1419_bases
ATGGCAGTTGCGTTTGATGAAATGAACGGCCCCGGCGGCGATGTTCGCGCGGCCTATCAGGAATTGTCCCGCTGGCTCGG
CGAAACGCCGCCCGAAGCCCTCACCCATCGACGCCAGGAAGCCGAGCTGCTGTTTCGCCGCATCGGCATCACCTTCGCGG
TGTACGGCGACGCCGAGGCGCAAGAGCGGCTGATCCCGTTCGACGTCATCCCGCGCATTCTGTCGGCGCAGGAATGGGCG
CGGATGGAACTCGGGCTGAAGCAGCGCGTCCGCGCGCTCAACATGTTCCTGCGCGACATCTATCACGGCCGCGACATCCT
GCGCGCCGGCGTCATCCCCGACGACCTGATCTTCCAGAACCCGGTGTTCCGCCCGGAGATGAACGGCCAGGCGGTGCCGC
ACGACGTCTACGTCCATATCGCCGGGATCGATATCGTCCGGGTCGACGACGAGCATTTCTACGTGCTGGAGGACAATGCG
CGGACGCCGTCGGGCGTCTCGTATATGCTGGAAAACCGCGAGATCATGATGCGGCTGTTTCCGGATCTGTTCGCGCGGCA
CCGCATTGCGCCGGTCGAACGCTATCCGGATGAGCTTTTGACCGCGCTGCGCTCGGTGGCTCCCACACATTCGTCGTCGG
AACCGACCGTGGCGCTGATGACACCGGGCGTGTTCAACTCGGCCTATTACGAGCACTCGTTCCTCGCCGACAAGCTCGGC
ATCGAACTGGTCGAAGGCCGGGACCTCGTCGTCAAGAACGACGAGGTGTTCATGCGCACCACCGAGGGGCTGAAGCGGGT
CGACGTGATCTATCGCCGGGTCGACGACGACTTCATCGATCCTCTCACCTTCCGCCCGGATTCGGTGCTCGGCGTGCCCG
GGCTGATGTCGGCCTATCGGGCCGGCAACGTCACGCTGGCCAACGCGGTCGGCACCGGCATCGCCGACGACAAGGCGGTG
TACAGCTATATGCCGGACATCGTGAAGTTCTATCTGGACGAAGAACCGATCCTGAAGAACGTCCCGACTTGGCGCTGCCG
CGAGCCGAGCGACCTGGCCTATGTGCTTGACCATCTGTCCGAGCTGGTGGTCAAGGAAGTGCACGGTTCCGGCGGCTACG
GCATGCTGATCGGCCCCACCGCCACCAAGGCGACGATCGAAGCGTTCCGCGAGAAGCTGAAGCGCGAGCCAGAGGGCTTC
ATCGCCCAACCGACGCTGGCACTGTCCACCTGCCCGACCTGCACCGAAGCCGGTCTCGCCCCGCGCCACGTCGACCTGCG
CCCGTTCGTGCTCACCGGCCGCGACCGCATCACCGTGGTGCCCGGCGGCCTGACCCGCGTTGCGCTGCAGGAAGGCTCGC
TGGTGGTGAATTCCAGCCAGGGCGGCGGCACCAAGGATACCTGGGTGCTGGATGAGTAA

Upstream 100 bases:

>100_bases
AAAACCATCCACTCCTTCCATATCGTGCTGGCCCGCCCCTTGCTACTGCTGTGTTCCATGCTGCAGTCTACGCAGCATTG
TGAGGAATCAGACTGGTTTC

Downstream 100 bases:

>100_bases
CCTGTCCTTGCCACCCCCTCGTTCGTCATTCCGGGATGCGCCCCAGCGGGGCTGGGCCCGGAATCCATCCTCCCGGCAGG
AGTTATGGATTCCGCGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MAVAFDEMNGPGGDVRAAYQELSRWLGETPPEALTHRRQEAELLFRRIGITFAVYGDAEAQERLIPFDVIPRILSAQEWA
RMELGLKQRVRALNMFLRDIYHGRDILRAGVIPDDLIFQNPVFRPEMNGQAVPHDVYVHIAGIDIVRVDDEHFYVLEDNA
RTPSGVSYMLENREIMMRLFPDLFARHRIAPVERYPDELLTALRSVAPTHSSSEPTVALMTPGVFNSAYYEHSFLADKLG
IELVEGRDLVVKNDEVFMRTTEGLKRVDVIYRRVDDDFIDPLTFRPDSVLGVPGLMSAYRAGNVTLANAVGTGIADDKAV
YSYMPDIVKFYLDEEPILKNVPTWRCREPSDLAYVLDHLSELVVKEVHGSGGYGMLIGPTATKATIEAFREKLKREPEGF
IAQPTLALSTCPTCTEAGLAPRHVDLRPFVLTGRDRITVVPGGLTRVALQEGSLVVNSSQGGGTKDTWVLDE

Sequences:

>Translated_472_residues
MAVAFDEMNGPGGDVRAAYQELSRWLGETPPEALTHRRQEAELLFRRIGITFAVYGDAEAQERLIPFDVIPRILSAQEWA
RMELGLKQRVRALNMFLRDIYHGRDILRAGVIPDDLIFQNPVFRPEMNGQAVPHDVYVHIAGIDIVRVDDEHFYVLEDNA
RTPSGVSYMLENREIMMRLFPDLFARHRIAPVERYPDELLTALRSVAPTHSSSEPTVALMTPGVFNSAYYEHSFLADKLG
IELVEGRDLVVKNDEVFMRTTEGLKRVDVIYRRVDDDFIDPLTFRPDSVLGVPGLMSAYRAGNVTLANAVGTGIADDKAV
YSYMPDIVKFYLDEEPILKNVPTWRCREPSDLAYVLDHLSELVVKEVHGSGGYGMLIGPTATKATIEAFREKLKREPEGF
IAQPTLALSTCPTCTEAGLAPRHVDLRPFVLTGRDRITVVPGGLTRVALQEGSLVVNSSQGGGTKDTWVLDE
>Mature_471_residues
AVAFDEMNGPGGDVRAAYQELSRWLGETPPEALTHRRQEAELLFRRIGITFAVYGDAEAQERLIPFDVIPRILSAQEWAR
MELGLKQRVRALNMFLRDIYHGRDILRAGVIPDDLIFQNPVFRPEMNGQAVPHDVYVHIAGIDIVRVDDEHFYVLEDNAR
TPSGVSYMLENREIMMRLFPDLFARHRIAPVERYPDELLTALRSVAPTHSSSEPTVALMTPGVFNSAYYEHSFLADKLGI
ELVEGRDLVVKNDEVFMRTTEGLKRVDVIYRRVDDDFIDPLTFRPDSVLGVPGLMSAYRAGNVTLANAVGTGIADDKAVY
SYMPDIVKFYLDEEPILKNVPTWRCREPSDLAYVLDHLSELVVKEVHGSGGYGMLIGPTATKATIEAFREKLKREPEGFI
AQPTLALSTCPTCTEAGLAPRHVDLRPFVLTGRDRITVVPGGLTRVALQEGSLVVNSSQGGGTKDTWVLDE

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 52784; Mature: 52653

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVAFDEMNGPGGDVRAAYQELSRWLGETPPEALTHRRQEAELLFRRIGITFAVYGDAEA
CEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCH
QERLIPFDVIPRILSAQEWARMELGLKQRVRALNMFLRDIYHGRDILRAGVIPDDLIFQN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHCC
PVFRPEMNGQAVPHDVYVHIAGIDIVRVDDEHFYVLEDNARTPSGVSYMLENREIMMRLF
CCCCCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
PDLFARHRIAPVERYPDELLTALRSVAPTHSSSEPTVALMTPGVFNSAYYEHSFLADKLG
HHHHHHCCCCCHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC
IELVEGRDLVVKNDEVFMRTTEGLKRVDVIYRRVDDDFIDPLTFRPDSVLGVPGLMSAYR
EEEECCCEEEEECCCEEEEEHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHHHHH
AGNVTLANAVGTGIADDKAVYSYMPDIVKFYLDEEPILKNVPTWRCREPSDLAYVLDHLS
CCCEEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHH
ELVVKEVHGSGGYGMLIGPTATKATIEAFREKLKREPEGFIAQPTLALSTCPTCTEAGLA
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEECCCEEECCCCCHHHCCCC
PRHVDLRPFVLTGRDRITVVPGGLTRVALQEGSLVVNSSQGGGTKDTWVLDE
CCCCCCCEEEEECCCEEEEECCCCEEEEEECCCEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
AVAFDEMNGPGGDVRAAYQELSRWLGETPPEALTHRRQEAELLFRRIGITFAVYGDAEA
EEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCH
QERLIPFDVIPRILSAQEWARMELGLKQRVRALNMFLRDIYHGRDILRAGVIPDDLIFQN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHCC
PVFRPEMNGQAVPHDVYVHIAGIDIVRVDDEHFYVLEDNARTPSGVSYMLENREIMMRLF
CCCCCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
PDLFARHRIAPVERYPDELLTALRSVAPTHSSSEPTVALMTPGVFNSAYYEHSFLADKLG
HHHHHHCCCCCHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC
IELVEGRDLVVKNDEVFMRTTEGLKRVDVIYRRVDDDFIDPLTFRPDSVLGVPGLMSAYR
EEEECCCEEEEECCCEEEEEHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHHHHH
AGNVTLANAVGTGIADDKAVYSYMPDIVKFYLDEEPILKNVPTWRCREPSDLAYVLDHLS
CCCEEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHH
ELVVKEVHGSGGYGMLIGPTATKATIEAFREKLKREPEGFIAQPTLALSTCPTCTEAGLA
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEECCCEEECCCCCHHHCCCC
PRHVDLRPFVLTGRDRITVVPGGLTRVALQEGSLVVNSSQGGGTKDTWVLDE
CCCCCCCEEEEECCCEEEEECCCCEEEEEECCCEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]