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The map label for this gene is nylB [H]

Identifier: 192290476

GI number: 192290476

Start: 2256285

End: 2257460

Strand: Reverse

Name: nylB [H]

Synonym: Rpal_2084

Alternate gene names: 192290476

Gene position: 2257460-2256285 (Counterclockwise)

Preceding gene: 192290477

Following gene: 192290475

Centisome position: 39.3

GC content: 63.95

Gene sequence:

>1176_bases
ATGTCCCCTTCCGATCTCGCCGCGCCGGAGGACGCATCTGGCGCCACGCTCGCGAACTGGCGCGAGCTGCCGTTCAGCCG
CTGGTCGTTCCGCAATATCGATGCCCTGATCCCGACCGAGGCGATCGCCAACGCGCCCGACGATATTTGGTCACTGCCGG
CTGCACCGCGCGCGCTTAATGAGTTTCGCGTCCGTGCCCAGGGCGGCGGAATACTCGACCTGGAAGGCTTTCTCGCTGCC
ACCGACACCGACGCGCTGGTCGTGCTCAAGGACGGCAGGATCGCGATCGAGGCCTACGCCAACGGCACCACTGCAGCGAC
GCCGCATATTATCATGTCGGCATCGAAGTCGATCACCGGGCTGATCGCCGGCATTCTCAGCGAGCGGGGCCATCTGCAGC
TCGACGCCGAGGTGACGAAGCTGATCCCGGAAGTGGCAGACACCGCCTATCAAGGCGCGACATTGCGGCAGATGCTCGAC
ATGCGGACCGGCATCCAGATCGACCTCGACGCCCAGCGCGCTTATGCGGTTGCCGCCGGCTGGGATCCAGTCCCTGAGGA
CTTGCCGCCGACCGATCTGAAGACGTTCTATCGCAGTTTCACGATCAAGCCGCAGCCGCATGGCGGGGCATTCCGCTATG
TCTCTGCCAACACCGATCTGCTCGGCTGGGCGATCGAACGCGCCACCGGCACCCGCTTTACGACGCTGGTGTCCGACCTG
TTGTGGCGGCCACTCGGCGCCGAGCAGCCCGCCTCGATCACCACCGATCGGCAGGGCCAGGCTCGCGCCACTGGCGGCTT
CAGCATGGTAGCACGCGATTTCGCGCGTATCGGCCAGATGATGCTCGACGACGGCTGCCGTGACGGCCGCATCATCGTTC
CGCCGTCATGGATCGACGATCTGTGGACCGGCGGAGACCAGGATGCGTGGCGACAGGGCGAGTGGCAGAAATTGTTCCCG
TACCGGAATTTCAGCTATCGCGGCAGCTGGTATGTGATTCACGATGAGCCGAAGACGATGTTCGCTATGGGAATTCACGG
ACAGAATCTGTTCATCGATCCGAAGAACCGGCTGGTGATCGCCAAACTATCGTCGCAGGGCGCAGCGGTCGACAATGCGG
CCTGGGCAGTGACGCATCGCGCACTGCCGGAGTTTTGCCGCTGCCTCGCCTCGTGA

Upstream 100 bases:

>100_bases
GCAGCAACACAATCAAGCTGCGCTTTCCGAGAATGGGCCACCAACATGGACCATCAGCGGCCTAGCGCCTACATCGTCCG
GGTACCCACCTGGAGTTCGC

Downstream 100 bases:

>100_bases
CATTACCAGGCGCGCGCGGGATTCGTGACACCCGAACAGGTGCGACTGATATAATTGAAGGACAAATAAAGAGGCCCGGT
CGCCATTCGGCGCCCGGGCC

Product: 6-aminohexanoate-dimer hydrolase

Products: NA

Alternate protein names: Nylon oligomers-degrading enzyme EII [H]

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSPSDLAAPEDASGATLANWRELPFSRWSFRNIDALIPTEAIANAPDDIWSLPAAPRALNEFRVRAQGGGILDLEGFLAA
TDTDALVVLKDGRIAIEAYANGTTAATPHIIMSASKSITGLIAGILSERGHLQLDAEVTKLIPEVADTAYQGATLRQMLD
MRTGIQIDLDAQRAYAVAAGWDPVPEDLPPTDLKTFYRSFTIKPQPHGGAFRYVSANTDLLGWAIERATGTRFTTLVSDL
LWRPLGAEQPASITTDRQGQARATGGFSMVARDFARIGQMMLDDGCRDGRIIVPPSWIDDLWTGGDQDAWRQGEWQKLFP
YRNFSYRGSWYVIHDEPKTMFAMGIHGQNLFIDPKNRLVIAKLSSQGAAVDNAAWAVTHRALPEFCRCLAS

Sequences:

>Translated_391_residues
MSPSDLAAPEDASGATLANWRELPFSRWSFRNIDALIPTEAIANAPDDIWSLPAAPRALNEFRVRAQGGGILDLEGFLAA
TDTDALVVLKDGRIAIEAYANGTTAATPHIIMSASKSITGLIAGILSERGHLQLDAEVTKLIPEVADTAYQGATLRQMLD
MRTGIQIDLDAQRAYAVAAGWDPVPEDLPPTDLKTFYRSFTIKPQPHGGAFRYVSANTDLLGWAIERATGTRFTTLVSDL
LWRPLGAEQPASITTDRQGQARATGGFSMVARDFARIGQMMLDDGCRDGRIIVPPSWIDDLWTGGDQDAWRQGEWQKLFP
YRNFSYRGSWYVIHDEPKTMFAMGIHGQNLFIDPKNRLVIAKLSSQGAAVDNAAWAVTHRALPEFCRCLAS
>Mature_390_residues
SPSDLAAPEDASGATLANWRELPFSRWSFRNIDALIPTEAIANAPDDIWSLPAAPRALNEFRVRAQGGGILDLEGFLAAT
DTDALVVLKDGRIAIEAYANGTTAATPHIIMSASKSITGLIAGILSERGHLQLDAEVTKLIPEVADTAYQGATLRQMLDM
RTGIQIDLDAQRAYAVAAGWDPVPEDLPPTDLKTFYRSFTIKPQPHGGAFRYVSANTDLLGWAIERATGTRFTTLVSDLL
WRPLGAEQPASITTDRQGQARATGGFSMVARDFARIGQMMLDDGCRDGRIIVPPSWIDDLWTGGDQDAWRQGEWQKLFPY
RNFSYRGSWYVIHDEPKTMFAMGIHGQNLFIDPKNRLVIAKLSSQGAAVDNAAWAVTHRALPEFCRCLAS

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: =3.5.1.46 [H]

Molecular weight: Translated: 42847; Mature: 42716

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSDLAAPEDASGATLANWRELPFSRWSFRNIDALIPTEAIANAPDDIWSLPAAPRALN
CCCCCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCCHHHHH
EFRVRAQGGGILDLEGFLAATDTDALVVLKDGRIAIEAYANGTTAATPHIIMSASKSITG
HHEEEECCCCEEEECCEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCEEEECCHHHHH
LIAGILSERGHLQLDAEVTKLIPEVADTAYQGATLRQMLDMRTGIQIDLDAQRAYAVAAG
HHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCEEEEEECC
WDPVPEDLPPTDLKTFYRSFTIKPQPHGGAFRYVSANTDLLGWAIERATGTRFTTLVSDL
CCCCCCCCCCHHHHHHHHHEECCCCCCCCEEEEEECCCCEEEEEEHHCCCCHHHHHHHHH
LWRPLGAEQPASITTDRQGQARATGGFSMVARDFARIGQMMLDDGCRDGRIIVPPSWIDD
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
LWTGGDQDAWRQGEWQKLFPYRNFSYRGSWYVIHDEPKTMFAMGIHGQNLFIDPKNRLVI
HHCCCCHHHHHCCCCCEECCCCCCCCCCCEEEEECCCCEEEEEEECCCEEEECCCCCEEE
AKLSSQGAAVDNAAWAVTHRALPEFCRCLAS
EEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPSDLAAPEDASGATLANWRELPFSRWSFRNIDALIPTEAIANAPDDIWSLPAAPRALN
CCCCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCCHHHHH
EFRVRAQGGGILDLEGFLAATDTDALVVLKDGRIAIEAYANGTTAATPHIIMSASKSITG
HHEEEECCCCEEEECCEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCEEEECCHHHHH
LIAGILSERGHLQLDAEVTKLIPEVADTAYQGATLRQMLDMRTGIQIDLDAQRAYAVAAG
HHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCEEEEEECC
WDPVPEDLPPTDLKTFYRSFTIKPQPHGGAFRYVSANTDLLGWAIERATGTRFTTLVSDL
CCCCCCCCCCHHHHHHHHHEECCCCCCCCEEEEEECCCCEEEEEEHHCCCCHHHHHHHHH
LWRPLGAEQPASITTDRQGQARATGGFSMVARDFARIGQMMLDDGCRDGRIIVPPSWIDD
HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
LWTGGDQDAWRQGEWQKLFPYRNFSYRGSWYVIHDEPKTMFAMGIHGQNLFIDPKNRLVI
HHCCCCHHHHHCCCCCEECCCCCCCCCCCEEEEECCCCEEEEEEECCCEEEECCCCCEEE
AKLSSQGAAVDNAAWAVTHRALPEFCRCLAS
EEECCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6646204; 6389532; 2512123 [H]